Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase from Pseudomonas stutzeri RCH2

 Score =  144 bits (362), Expect = 8e-39
 Identities = 100/368 (27%), Positives = 181/368 (49%), Gaps = 24/368 (6%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNVAH 81
           IH +GI G  M  +A +    G++++GSD  AN    ++ +L  +G  +  G+E   +  
Sbjct: 3   IHILGICGTFMGSLAVLAKELGHRVTGSD--ANVYPPMSTQLQAQGIELTQGYEPSQLEP 60

Query: 82  A-SVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTTTAL 139
           A  +VV+  A++  NP ++    K +P V   + LA+ +++ R  +A AGTHGKTTT+++
Sbjct: 61  APDLVVIGNALSRSNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAAAGTHGKTTTSSM 120

Query: 140 VTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDAS-------FLHLQPMV 192
           +  +   AG+ P F+ GG+ ++ G +ARLG +   + EADE D++       F+H +P  
Sbjct: 121 LAWVLEHAGMSPGFLIGGVPQNFGISARLGGTPFFVVEADEYDSAFFDKRSKFVHYRPRT 180

Query: 193 TIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR-VSRQVI 251
            I+ N+E DH D +  D   +++ F   +  +P  G  I    +  ++ +I       V 
Sbjct: 181 AILNNLEFDHADIF-PDLAAIERQFHHLVRTVPSEGLVIHPESEQALKRVIGMGCWTPVQ 239

Query: 252 TYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVATEDD 311
           T G       ++     +    +F V+  G     +   + G+HN  NA A +A A    
Sbjct: 240 TTGDGGQWQAKL----LSADGSRFEVIFDGAVQGVVEWELTGQHNVNNALATLAAARHVG 295

Query: 312 IRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEK 371
           +  +    A++  +   RR + + E    NGV  + DD+ HHPT +  T+   R    + 
Sbjct: 296 VLPKQGAEALSEFRSVKRRMEKVAEV---NGVT-IYDDFAHHPTAIATTLDGLRKRVGDT 351

Query: 372 RLVMIFQP 379
            ++ + +P
Sbjct: 352 PIIAVIEP 359