Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., UDP-N-acetylmuramate (RefSeq) from Shewanella amazonensis SB2B

 Score =  162 bits (410), Expect = 2e-44
 Identities = 123/467 (26%), Positives = 223/467 (47%), Gaps = 37/467 (7%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNV-A 80
           +H +GI G  M G+A +    G++++GSD  AN    ++ +L ++G  +  G +   + +
Sbjct: 3   VHILGICGTFMGGLALLARAMGHKVTGSD--ANVYPPMSTQLEEQGIELIQGFDPVQLES 60

Query: 81  HASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTTTAL 139
              +VV+  A++  NP ++A   K +      + L + ++  R  +AVAGTHGKT+T+++
Sbjct: 61  EPDLVVIGNAMSRGNPCVEAVLNKGMAYTSGPQFLRDHILPGRWVLAVAGTHGKTSTSSM 120

Query: 140 VTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDAS-------FLHLQPMV 192
           +  +    G +P F+ GG+ ++ G +ARLG+S   + EADE D++       F+H QP  
Sbjct: 121 LAWVLEHCGYEPGFLIGGVPQNFGVSARLGNSPFFVVEADEYDSAFFDKRSKFVHYQPKT 180

Query: 193 TIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR-VSRQVI 251
            ++ N+E DH D +     ++++ F   +  +P  G+ I       + E+I + +  +  
Sbjct: 181 LVINNLEFDHADIF-DSLADIQRQFSHVIRTVPGCGKVIWPKGSKAVAEVIEKGLWSEQE 239

Query: 252 TYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVATEDD 311
           T+    DAD  +     +G   +F V+  G+    +   + G HN  NA  AIA A    
Sbjct: 240 TFSHQADADWSVRPLAADGH--KFEVLFGGEVQGVLDWQLIGNHNMENAVMAIAAARHVG 297

Query: 312 IRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEK 371
           +   A + A++      RR + +GE     G   L DD+ HHPT ++ T+K  R      
Sbjct: 298 VAPAAAIEALSGFMPPKRRLELIGEV----GGVSLYDDFAHHPTAIETTLKGLRAKVGNA 353

Query: 372 RLVMIFQPHRYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCRTIRSRG 431
           R+ ++ +P   T  R ++ D           + L +  A E  +  AD  ++   IR   
Sbjct: 354 RIFVVLEPRSNTMKRGVHKD----------TLALSMALADEAFLYQAD--NIGWDIRDAM 401

Query: 432 KIDPIFVPDSQTLPSVLANI---LQDGDLVLTQGAGDVGKVARHLAA 475
              P+ V     + S++A +   +Q GD ++    G  G +   L A
Sbjct: 402 AQAPLPVDVDYDIDSIVAKVTAKVQRGDQLVVMSNGGFGGIHGKLKA 448