Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  692 bits (1787), Expect = 0.0
 Identities = 336/479 (70%), Positives = 399/479 (83%)

Query: 6   TQDLAQIRAMVPEMRRVKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDRLAD 65
           T+   Q+R M+PEMRRV+ IHF+GIGGAGM GIAEVL+NEGYQ+SGSD+A NAVT+RL  
Sbjct: 4   TEKYRQLRTMIPEMRRVRRIHFVGIGGAGMGGIAEVLVNEGYQVSGSDIADNAVTERLGS 63

Query: 66  KGATIFIGHEAHNVAHASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGI 125
            GA IFIGH A NV+   VVVVSTAI   NPEI AA+EKRIPIVRRAEMLAELMR+RHG+
Sbjct: 64  LGARIFIGHGADNVSGVDVVVVSTAIKHDNPEIAAAKEKRIPIVRRAEMLAELMRYRHGV 123

Query: 126 AVAGTHGKTTTTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
           AVAGTHGKTTTT+L+  IY +A  DPTFV GGL+ SAGTNARLGSSR LIAEADESDASF
Sbjct: 124 AVAGTHGKTTTTSLIASIYGQAERDPTFVIGGLLNSAGTNARLGSSRYLIAEADESDASF 183

Query: 186 LHLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR 245
           LHLQPMVT+VTNIEADHMDTYGGDFE LK TF+DF+HNLPFYG A++C+DDPV+RELIPR
Sbjct: 184 LHLQPMVTVVTNIEADHMDTYGGDFEKLKSTFVDFMHNLPFYGVAVVCVDDPVVRELIPR 243

Query: 246 VSRQVITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIA 305
           + RQV+TYGFS+DADV+  N+ Q G   +FTV RKGK +L + +N+PG+HN LN+ AAIA
Sbjct: 244 IGRQVVTYGFSDDADVQALNFVQEGHSCRFTVRRKGKDDLSLKVNLPGQHNVLNSLAAIA 303

Query: 306 VATEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAAR 365
           VATEDDI DEAI++A+A  QG GRRF HLG+F T NG  MLVDDYGHHP+EV  TIKAAR
Sbjct: 304 VATEDDIEDEAIVKALAEFQGIGRRFQHLGKFATPNGEVMLVDDYGHHPSEVLATIKAAR 363

Query: 366 NGWAEKRLVMIFQPHRYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCR 425
            GW +KRLVM +QPHRYTRTRDLY+DF  VL QVD L++L+VYAAGE PI GADGR+LCR
Sbjct: 364 AGWPDKRLVMAYQPHRYTRTRDLYEDFVEVLSQVDKLVLLEVYAAGETPIPGADGRALCR 423

Query: 426 TIRSRGKIDPIFVPDSQTLPSVLANILQDGDLVLTQGAGDVGKVARHLAALELNIGRMQ 484
           +IR RG+++PIFV   + L SVL ++L DGDL+L QGAG++G ++R LAA EL   +++
Sbjct: 424 SIRQRGQLEPIFVASPEQLTSVLPDVLADGDLLLCQGAGNIGALSRELAATELGFAKVE 482