Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  395 bits (1016), Expect = e-114
 Identities = 211/469 (44%), Positives = 293/469 (62%), Gaps = 14/469 (2%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDRLADKGATIFIGHEAHNVAHASV 84
           +HF+GIGG GMSGIAEVL N GY++ GSDL+ NA   RL D G  I IGH+A N+  A V
Sbjct: 11  LHFVGIGGIGMSGIAEVLHNLGYRVQGSDLSDNANVKRLRDLGIPIAIGHKAANLGDAQV 70

Query: 85  VVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAVAGTHGKTTTTALVTQIY 144
           VV+S+A+   NPE+  AR + +P+VRRAEML ELMR +  IAVAGTHGKTTTT+LV Q+ 
Sbjct: 71  VVISSAVKASNPEVMDARARFLPVVRRAEMLGELMRLKWSIAVAGTHGKTTTTSLVAQLL 130

Query: 145 SEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDASFLHLQPMVTIVTNIEADHMD 204
             AGLDPT +NGG++ + GTNA LG+   ++ EADESD +F  L   +++VTNI+ +H+D
Sbjct: 131 DAAGLDPTVINGGILNARGTNAYLGTGEWMVVEADESDGTFTKLPATISLVTNIDPEHLD 190

Query: 205 TYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRV-SRQVITYGFSEDADVRI 263
            Y G F+ +++ F  F+HNLPFYG A +CID P ++ +IP++  R++ITYG S  AD+R 
Sbjct: 191 FY-GTFDKVREAFRAFIHNLPFYGFACMCIDHPEVQAMIPQLQDRKIITYGLSPQADIRG 249

Query: 264 ENYRQNGQQGQFTVVRKGKAN------LDITLNIPGRHNALNAAAAIAVATEDDIRDEAI 317
            N     +  +F V+   +A         I L + GRHN LNA  AI +A E  I D  I
Sbjct: 250 ANVTLGPRGARFDVILTDRAGGGSRTIEGIRLPMYGRHNVLNALGAIGIAAEMGIDDAVI 309

Query: 318 LRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEKRLVMIF 377
              + + +G  RRF   G+     G   ++DDYGHHP E+   +KAAR+   E+ ++ + 
Sbjct: 310 RDGLYHFEGVKRRFTRTGD----AGGVTVIDDYGHHPVEIAAVLKAARDA-TEREVIAVV 364

Query: 378 QPHRYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCRTIRSRGKIDPIF 437
           QPHRY+R   L++DF       D +++ DVYAAGE+PI GA   +L   ++  G      
Sbjct: 365 QPHRYSRLNSLFEDFCTCFNDADQVVVADVYAAGEQPIPGASKEALAEGLKVHGHKSVHV 424

Query: 438 VPDSQTLPSVLANILQDGDLVLTQGAGDVGKVARHL-AALELNIGRMQQ 485
           + + Q LP ++A I + GDLV+  GAG +   A  L   LE   GR +Q
Sbjct: 425 LTNEQALPELIARIAKPGDLVVCLGAGSISTWANALPKQLEAVQGRRRQ 473