Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Shewanella loihica PV-4

 Score =  675 bits (1742), Expect = 0.0
 Identities = 328/472 (69%), Positives = 391/472 (82%)

Query: 3   IKHTQDLAQIRAMVPEMRRVKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDR 62
           IK  +  AQ+R ++PEMRRVK IHF+GIGGAGM GIAEVL+NEGY++SGSD+A NAVT R
Sbjct: 2   IKTEEKYAQLRTIIPEMRRVKRIHFVGIGGAGMGGIAEVLVNEGYRLSGSDIAENAVTAR 61

Query: 63  LADKGATIFIGHEAHNVAHASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFR 122
           L   GA IFIGH A  V  A VVVVSTAI+  NPEI AA+E+RIPIVRRAEMLAELMR+R
Sbjct: 62  LKRLGAAIFIGHSADQVEGADVVVVSTAIDASNPEILAAQERRIPIVRRAEMLAELMRYR 121

Query: 123 HGIAVAGTHGKTTTTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESD 182
           HG+AVAGTHGKTTTT+L+  +Y +A  DPTFV GGL+ SAGTNARLG SR LIAEADESD
Sbjct: 122 HGVAVAGTHGKTTTTSLIASVYGQAERDPTFVIGGLLNSAGTNARLGKSRYLIAEADESD 181

Query: 183 ASFLHLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIREL 242
           ASFLHLQPMV++VTNIEADHMDTY GDFE LK TF+DFLHNLPFYG A+ CIDDPV+RE+
Sbjct: 182 ASFLHLQPMVSVVTNIEADHMDTYEGDFEKLKSTFVDFLHNLPFYGVAVACIDDPVVREI 241

Query: 243 IPRVSRQVITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAA 302
           +PR+ R+V+TYGFSEDADV+  N+ Q G   +FTV R+G A+LD+ +N+PGRHN LNA A
Sbjct: 242 LPRIGRKVVTYGFSEDADVQALNFEQQGYSSRFTVRREGMADLDLRVNLPGRHNVLNALA 301

Query: 303 AIAVATEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIK 362
           AIAVATED+I DEAI+RA+   QG GRRF  LGEF T  G  MLVDDYGHHP+EV  TIK
Sbjct: 302 AIAVATEDEIEDEAIIRALDEFQGIGRRFQQLGEFTTTAGEVMLVDDYGHHPSEVAATIK 361

Query: 363 AARNGWAEKRLVMIFQPHRYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRS 422
           AAR+GW +KRLVMI+QPHRY+RTRDLYDDF  VL QVD L++LDVY+AGE P+ GAD R+
Sbjct: 362 AARSGWPDKRLVMIYQPHRYSRTRDLYDDFVEVLAQVDCLLLLDVYSAGEAPVPGADSRA 421

Query: 423 LCRTIRSRGKIDPIFVPDSQTLPSVLANILQDGDLVLTQGAGDVGKVARHLA 474
           LCR+IR RG++DPIFV + + L ++L  +LQ GDL+LTQGAG++G ++R LA
Sbjct: 422 LCRSIRQRGQLDPIFVAEPEQLQTILPGVLQGGDLLLTQGAGNIGALSRQLA 473