Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., UDP-N-acetylmuramate (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (384), Expect = 2e-41
 Identities = 106/385 (27%), Positives = 192/385 (49%), Gaps = 27/385 (7%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNVAH 81
           +H +GI G  M G+A +    G++++GSD  AN    ++ +L ++G  +  G +   +  
Sbjct: 22  VHILGICGTFMGGLALLARANGHKVTGSD--ANVYPPMSTQLEEQGIELIQGFDPSQLGQ 79

Query: 82  -----ASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTT 135
                  +VV+  A++  NP ++A   + +      + LAE ++  R  +AV+GTHGKT+
Sbjct: 80  NEDDAPDLVVIGNAMSRGNPCVEAVLNRGLKYTSGPQFLAEHILTNRWVLAVSGTHGKTS 139

Query: 136 TTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDAS-------FLHL 188
           T++++  I  + G  P F+ GG+ ++ G +ARLG S   + EADE D++       F+H 
Sbjct: 140 TSSMLAWILEDCGYAPGFLIGGVPQNFGVSARLGDSPFFVVEADEYDSAFFDKRSKFVHY 199

Query: 189 QPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR--V 246
           QP   ++ N+E DH D +  D + +++ F   +  +P  G+ I       +RE+I     
Sbjct: 200 QPRTLVINNLEFDHADIF-DDLKAIQRQFNHVIRTVPGQGKVIWPSASDAVREVIDMGCW 258

Query: 247 SRQVITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAV 306
           S Q      +       E   ++G    F +   G++   +  ++ G+HN  NA  AIA 
Sbjct: 259 SEQETYNLMAGSPGWYSELLSEDGH--SFELFFDGESQGVLDWSLIGQHNVENATMAIAA 316

Query: 307 ATEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARN 366
           A    ++  A + A+       RR + +G   T N +A + DD+ HHPT +  T++  R 
Sbjct: 317 ARHVGVKPAAAIEALTRFAPPKRRMELIG---TVNDIA-VYDDFAHHPTAIATTLQGCRA 372

Query: 367 GWAEKRLVMIFQPHRYTRTRDLYDD 391
              E R++++ +P   T  R ++ D
Sbjct: 373 KVGEGRIIVVLEPRSNTMKRGVHKD 397