Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  688 bits (1776), Expect = 0.0
 Identities = 334/473 (70%), Positives = 397/473 (83%)

Query: 6   TQDLAQIRAMVPEMRRVKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDRLAD 65
           T+   Q+R+M+PEMRR+K IHF+GIGGAGM GIAEVL+NEGY +SGSD+A NAVTDRL  
Sbjct: 4   TERYLQLRSMIPEMRRIKRIHFVGIGGAGMGGIAEVLVNEGYVVSGSDIAQNAVTDRLCL 63

Query: 66  KGATIFIGHEAHNVAHASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGI 125
            GA I IGH A NV  A VVVVSTAIN QNPEI AA+E RIPIVRRAEMLAELMR+RHG+
Sbjct: 64  LGAKIHIGHGADNVQQADVVVVSTAINPQNPEIIAAKELRIPIVRRAEMLAELMRYRHGV 123

Query: 126 AVAGTHGKTTTTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDASF 185
           A+AGTHGKTTTT+L+  +Y +AG DPTFV GGL+ SAGTNARLG+SR LIAEADESDASF
Sbjct: 124 AIAGTHGKTTTTSLIASLYGQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESDASF 183

Query: 186 LHLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR 245
           LHLQPMV++VTNIEADHMDTYGGDFE LK TF+DFLHNLPFYG A++CIDDPV+RE++PR
Sbjct: 184 LHLQPMVSVVTNIEADHMDTYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDPVVREIMPR 243

Query: 246 VSRQVITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIA 305
           +SR ++TYGF +DADV+  N+ Q G Q +FTV RKGK +LD+ LN+PG+HN LNA AAIA
Sbjct: 244 ISRHIVTYGFRDDADVQALNFSQQGHQCRFTVRRKGKEDLDLLLNLPGQHNVLNALAAIA 303

Query: 306 VATEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAAR 365
           VATED+I D AI++A+A  QG GRRF HLG+F T  G  MLVDDYGHHP+EV  TIKAAR
Sbjct: 304 VATEDEIDDSAIIQALAEFQGIGRRFQHLGKFATPKGEVMLVDDYGHHPSEVAATIKAAR 363

Query: 366 NGWAEKRLVMIFQPHRYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCR 425
            GW EKRLVM +QPHRYTRTRDLY+DF  VL QVD L++LDVY+AGE PI GADGR+LCR
Sbjct: 364 AGWPEKRLVMAYQPHRYTRTRDLYEDFIEVLSQVDCLLLLDVYSAGEAPIPGADGRALCR 423

Query: 426 TIRSRGKIDPIFVPDSQTLPSVLANILQDGDLVLTQGAGDVGKVARHLAALEL 478
           +IR RG++DPIF+   + L  VL ++LQ+GDL+LTQGAG++G ++R LAA EL
Sbjct: 424 SIRLRGQLDPIFIASPEQLAEVLPDVLQEGDLLLTQGAGNIGALSRKLAASEL 476