Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 15/265 (5%)

Query: 74  HEAHNVAHASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAVAGTHGK 133
           H    + +A  V+ S  I    P I   + +  P++   E        +  I + G++GK
Sbjct: 24  HTEELILNADEVIKSPGIPNDAPLILKLKAQGTPVISEIEFAGRYTDAKM-ICITGSNGK 82

Query: 134 TTTTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSR-----ILIAEADESDASFLHL 188
           TTTT+L+  I+  A L     N GL  + G +  L  +       +I  +     +  + 
Sbjct: 83  TTTTSLIYHIFKSADL-----NVGLAGNIGKSLALQVAEEHHDYYIIELSSFQLDNMYNF 137

Query: 189 QPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRVSR 248
           +  + ++ NI  DH+D Y    +N          N       I   DDP+I++ + +   
Sbjct: 138 RANIAVLMNITPDHLDRYDHCMQNYIDAKFRITQNQTTDDAFIFWNDDPIIKQELAKHGL 197

Query: 249 QVITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLD-ITLNIPGRHNALNAAAAIAVA 307
           +   Y F   A V+ +      +  +  +      N++   L + G+HN  N+ AA   A
Sbjct: 198 KAHLYPF---AAVKEDGAIAYVEDHEVKITEPIAFNMEQEELALTGQHNLYNSLAAGISA 254

Query: 308 TEDDIRDEAILRAMANTQGTGRRFD 332
               I  E I +A+++ +G   R +
Sbjct: 255 NLAGITKENIRKALSDFKGVEHRLE 279