Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  224 bits (571), Expect = 5e-63
 Identities = 144/458 (31%), Positives = 234/458 (51%), Gaps = 32/458 (6%)

Query: 22  VKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDRLADKGATIFIGHEAHNVAH 81
           +K+++F+G GG GMS +    L++G  ++G D     +T+ L  +GA I        +  
Sbjct: 6   IKSVYFVGAGGIGMSALVRYFLSKGKVVAGYDRTPTPLTENLIAEGAQIHYEENVRLIPE 65

Query: 82  A------SVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAVAGTHGKTT 135
           A      ++VV++ A+ +++ E+   R     I +RA++L  +     G+ VAGTHGKTT
Sbjct: 66  ACKDKESTLVVLTPAVPQEHEELVYFRNNGFEIQKRAQVLGTITHSSKGLCVAGTHGKTT 125

Query: 136 TTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGS-SRILIAEADESDASFLHLQPMVTI 194
           T+ +   ++ ++ ++ T   GG+ K+ GTN  L   S   + EADE D SF  L P +++
Sbjct: 126 TSTMTAHLFHQSHIECTAFLGGISKNYGTNLLLSQKSPYTVIEADEFDRSFHWLSPYMSV 185

Query: 195 VTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRE---LIPRVSRQVI 251
           +T  + DH+D YG        T   +L +   Y   I      +IR+   L P+V   V 
Sbjct: 186 ITATDPDHLDIYG--------TEKAYLESFEHYTTLIQPGGALIIRKGISLQPKVQAGVR 237

Query: 252 TYGFSED-ADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVATED 310
            Y +S D  D   EN R    +     V       +I L +P   N  N  AA+A+A  +
Sbjct: 238 VYTYSRDEGDFHAENIRIGNGEIFIDFVAPDTRINNIQLGVPVSINIENGVAAMALAHLN 297

Query: 311 DIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAE 370
            + DE I + M + +G  RRFD    F+  N   + + DY HHP+E+  ++ + R  + +
Sbjct: 298 GVTDEEIRQGMNSFRGVDRRFD----FKIKNDQVVFLSDYAHHPSEIKQSVLSIRELYKD 353

Query: 371 KRLVMIFQPHRYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCRTIRSR 430
           K++  IFQPH YTRTRD Y DFA+ L  +D +I++D+Y A E PI G   + +   +R  
Sbjct: 354 KKITAIFQPHLYTRTRDFYQDFADSLSLLDEVILVDIYPARETPIPGVTSKLIYDNLRPG 413

Query: 431 GKIDPIFVPDSQTLPSVLANILQDG--DLVLTQGAGDV 466
                  +  S      + NIL+D   ++++T GAGD+
Sbjct: 414 -------IEKSMCKKEEILNILKDKNIEVLITLGAGDI 444