Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., UDP-N-acetylmuramate (RefSeq) from Shewanella sp. ANA-3

 Score =  150 bits (380), Expect = 7e-41
 Identities = 106/392 (27%), Positives = 192/392 (48%), Gaps = 23/392 (5%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNVAH 81
           +H +GI G  M G+A +   +G++++GSD  AN    ++ +L ++G  +  G +   +  
Sbjct: 3   VHILGICGTFMGGLALLARAKGHRVTGSD--ANVYPPMSTQLEEQGIELIQGFDQSQLGE 60

Query: 82  AS----VVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTT 136
           A     +VV+  A++  NP ++A     IP     + LA+ ++  R  +AV+GTHGKT+T
Sbjct: 61  AGSYPDLVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLADHILPERWVLAVSGTHGKTST 120

Query: 137 TALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDAS-------FLHLQ 189
           ++++  I  + G  P F+ GG+ ++ G +ARLG S   + EADE D++       F+H  
Sbjct: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESAFFVVEADEYDSAFFDKRSKFVHYH 180

Query: 190 PMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRVSRQ 249
           P   ++ N+E DH D +  D   +++ F   +  +P  G+ I   D   +++ I      
Sbjct: 181 PRTLVINNLEFDHADIF-ADLAAIQKQFHHLIRTVPGQGKVIWPADSHAVKQTIDMGCWS 239

Query: 250 VITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVATE 309
                 + +          +    +F V   G++   +   + G+HN  NA  AIA A  
Sbjct: 240 EQETFHTAEVTKGWHAKALSDDCHEFEVFFDGESQGVLEWALIGQHNIENALMAIAAARH 299

Query: 310 DDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWA 369
             ++  A + A+       RR + LG   T +GV+ + DD+ HHPT +  TIK  R    
Sbjct: 300 VGVKPSAAIAALTRFVPPKRRLELLG---TVHGVS-VYDDFAHHPTAIATTIKGMRAKVG 355

Query: 370 EKRLVMIFQPHRYTRTRDLY-DDFANVLEQVD 400
           + ++ ++ +P   T    ++ D  A+ + Q D
Sbjct: 356 QSKITIVLEPRSNTMKSGVHKDTLAHSMLQAD 387