Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 918 a.a., preprotein translocase, SecA subunit from Pseudomonas stutzeri RCH2

 Score = 1155 bits (2987), Expect = 0.0
 Identities = 573/913 (62%), Positives = 716/913 (78%), Gaps = 13/913 (1%)

Query: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60
           M   LL K+ GS+N+R ++R+ K V+ +N  E    +LSDE+L++KT EF+ R+E+GE L
Sbjct: 7   MFAPLLKKLFGSKNEREVKRMLKAVQSVNALEEQMLSLSDEQLRSKTEEFKARLEKGETL 66

Query: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120
           DQ+LPEAF+  REA KRV GMRHFDVQLIGGM LH G+IAEMRTGEGKTL ATLA YLNA
Sbjct: 67  DQILPEAFSVCREAGKRVMGMRHFDVQLIGGMTLHEGRIAEMRTGEGKTLVATLAVYLNA 126

Query: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180
           L GKGVH+VTVNDYLA+RDA   RPL+EFLG++VG+  P  P   K+ AY ADI YGTNN
Sbjct: 127 LAGKGVHVVTVNDYLARRDANWMRPLYEFLGLSVGIVTPFQPPEEKRAAYAADITYGTNN 186

Query: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240
           EFGFDYLRDNMAF  +++ QR   FAV+DEVDSILIDEARTPLIISG AEDSS LY +IN
Sbjct: 187 EFGFDYLRDNMAFSLQEKNQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYQQIN 246

Query: 241 KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS 300
           +LIP L +  +E+      +GHF++DEK++QV L E G +++EELL + G++ EG++LYS
Sbjct: 247 QLIPRLTQHIEEEEGVVTQEGHFSIDEKTRQVELNEAGHQYIEELLTQAGLLAEGESLYS 306

Query: 301 PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA 360
             N+ LL HV A LRAH LF +NV+YIV  + +V+++DEHTGRTMPGRR S+GLHQA+EA
Sbjct: 307 AHNLGLLTHVYAGLRAHKLFHRNVEYIV-QNNQVLLIDEHTGRTMPGRRLSEGLHQAIEA 365

Query: 361 KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV 420
           KEG++IQ E+QTLAS TFQNYFRLY+KLSGMTGTADTEAFEFQQIY L  VVIPTN+P+ 
Sbjct: 366 KEGLQIQPESQTLASTTFQNYFRLYKKLSGMTGTADTEAFEFQQIYNLPVVVIPTNRPLA 425

Query: 421 RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL 480
           R D  D+VY ++ EKFAAII DIK+  E+G+PVLVGT +IE SE +S  L+K G +H VL
Sbjct: 426 RKDFNDLVYLTQEEKFAAIIADIKECREQGRPVLVGTATIESSEYVSRLLEKEGFEHKVL 485

Query: 481 NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIKA 540
           NAK H+KEAEI+A+AG+PGAVTIATNMAGRGTDI+LGG+W+ +V  L+NPT+EQ+  IKA
Sbjct: 486 NAKHHDKEAEIIAQAGRPGAVTIATNMAGRGTDILLGGNWEVEVAALENPTEEQVAQIKA 545

Query: 541 EWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFT 600
           +W++ H QVL+AGGLH+I +ERHESRRIDNQLRGR+GRQGD GSSRFYLS+ED+L+RIF 
Sbjct: 546 DWQKRHQQVLEAGGLHVIASERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDSLMRIFA 605

Query: 601 SDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVV 659
           SDR+   +++ GM+ GEAIE +M++ +IEKAQRKVEGRNFD+RKQLLEYDDVAN+QRKV+
Sbjct: 606 SDRVKNFMKALGMESGEAIEHRMVTNAIEKAQRKVEGRNFDMRKQLLEYDDVANEQRKVI 665

Query: 660 YELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLP 719
           Y +R+ L++AD+I   IA+ R++ L+A +  +IPPQSL + WDI GLE  L +DF   LP
Sbjct: 666 YHMRNSLLAADEIGQTIAEFRQEALDAAISAHIPPQSLPEQWDIPGLEAVLYSDFGTRLP 725

Query: 720 IQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHL 779
           +Q WLD D KLYEE LRERI+E  +  Y  KE       +R+FEK ++L+ LD LWK+HL
Sbjct: 726 VQQWLDEDEKLYEETLRERILEALLAAYNEKEDLAGVEALRSFEKQIVLRVLDDLWKDHL 785

Query: 780 AAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQEEVER 839
           + MDHLR GIHLRGYAQKNPKQEYKRESF LF+DLLES+K D I VLS V+V++++  E 
Sbjct: 786 STMDHLRHGIHLRGYAQKNPKQEYKRESFTLFQDLLESIKRDSIRVLSHVQVRREDPAEE 845

Query: 840 MEAQRRAQAEEAARHAQAQHASADDAEQDESNQPM----------VRDERKVGRNEPCPC 889
            EA+ R +AEE A+  Q QHA     +Q E    +          VR E K+GRNEPCPC
Sbjct: 846 -EARLRREAEELAKRMQFQHAEVSALDQPEEEPEVEGQADVAATPVRTEPKIGRNEPCPC 904

Query: 890 GSGKKYKQCHGQI 902
           GSGKKYK CHGQ+
Sbjct: 905 GSGKKYKHCHGQV 917