Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 913 a.a., protein translocase subunit secA from Pseudomonas syringae pv. syringae B728a

 Score = 1149 bits (2972), Expect = 0.0
 Identities = 578/916 (63%), Positives = 718/916 (78%), Gaps = 16/916 (1%)

Query: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60
           M   LL K+ GS+N+R ++R+ K V+ +N +E    ALSDE+L+AKT EF+ RI +GE L
Sbjct: 1   MFAPLLKKLFGSKNEREVKRMLKTVQIVNAFEEQMVALSDEQLRAKTEEFKARIAKGETL 60

Query: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120
           DQLLPEAFA  REA KRV GMRHFDVQLIGGM LH GQIAEMRTGEGKTL  TLA YLNA
Sbjct: 61  DQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGQIAEMRTGEGKTLVGTLAVYLNA 120

Query: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180
           L GKGVH+VTVNDYLA+RDA   RPL+EFLG+TVG+  P  P   K+ AY ADI YGTNN
Sbjct: 121 LSGKGVHVVTVNDYLARRDANWMRPLYEFLGLTVGIVTPFQPPEEKRAAYAADITYGTNN 180

Query: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240
           E+GFDYLRDNMAF  +D+ QR   FAV+DEVDSILIDEARTPLIISG AEDSS LY  IN
Sbjct: 181 EYGFDYLRDNMAFSMDDKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYTEIN 240

Query: 241 KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS 300
           +LIP L++  +E   E    GHFTVDEK++QV L E G +F+EE+L + G++ EG++LYS
Sbjct: 241 RLIPKLEQHIEEVEGEVTKAGHFTVDEKTRQVELNEAGHQFIEEMLTEVGLLAEGESLYS 300

Query: 301 PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA 360
             N+ LL HV A LRAH LF +NV+YIV+ DG+V++VDEHTGRTMPGRR S+GLHQA+EA
Sbjct: 301 AHNLGLLTHVYAGLRAHKLFNRNVEYIVS-DGQVLLVDEHTGRTMPGRRLSEGLHQAIEA 359

Query: 361 KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV 420
           KEG+ IQ E+QTLAS TFQNYFRLY KLSGMTGTADTEAFEF QIY L  +VIP NKP+ 
Sbjct: 360 KEGLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFEFHQIYNLAVMVIPPNKPLA 419

Query: 421 RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL 480
           R D  D+VY +  EK+AAI+ DIK  + + +PVLVGT +IE SE +SN L K GI+H VL
Sbjct: 420 RKDFNDLVYLTAEEKYAAIVTDIKACIAENRPVLVGTATIETSEHMSNLLNKEGIEHKVL 479

Query: 481 NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIKA 540
           NAKFHEKEAEI+A+AG+PGA+TIATNMAGRGTDI+LGG+W+ +V  L++PT EQI  IKA
Sbjct: 480 NAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVANLEDPTPEQIAQIKA 539

Query: 541 EWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFT 600
           +W++ H QV++AGGLH+I +ERHESRRIDNQLRGR+GRQGD GSSRFYLS+ED+L+RIF 
Sbjct: 540 DWQKRHQQVIEAGGLHVIASERHESRRIDNQLRGRAGRQGDTGSSRFYLSLEDSLMRIFA 599

Query: 601 SDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVV 659
           SDR+   +++ GM  GEAIE +M++ +IEKAQRKVEGRNFDIRKQLLE+DDVAN+QRKV+
Sbjct: 600 SDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVANEQRKVI 659

Query: 660 YELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLP 719
           Y +R+ L++A++I + IA  RE+VLN ++ ++IPPQSL + W++ GLE  L  DF + LP
Sbjct: 660 YHMRNTLLAAENIGETIADFREEVLNNLISQHIPPQSLPEQWNVAGLESALNTDFAVQLP 719

Query: 720 IQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHL 779
           IQ WLD D+KL+E++LRE+I+ Q +  Y  KE   S   +R+FEK ++L+ LD LWK+HL
Sbjct: 720 IQQWLDEDDKLHEDSLREKIMAQLLVAYNEKEDQASAEALRSFEKQILLRVLDDLWKDHL 779

Query: 780 AAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQEEVER 839
           + MDHLR GIHLRGYAQKNPKQEYKRESF LF++LL+S+K D I VLS V+V ++E+ E 
Sbjct: 780 STMDHLRHGIHLRGYAQKNPKQEYKRESFTLFQELLDSIKRDTIRVLSHVQV-RREDPEE 838

Query: 840 MEAQRRAQAEEAARHAQAQHASADDAEQ---DE---------SNQPMVRDERKVGRNEPC 887
            EA+ R  AEE A   Q +HA A   EQ   DE         +++P VR+++K+GRNE C
Sbjct: 839 EEARLRQDAEELASRMQFEHAPAPGIEQPLLDEEGGGAPVAVASEP-VRNDQKLGRNELC 897

Query: 888 PCGSGKKYKQCHGQIN 903
            CGSGKK+K CHGQIN
Sbjct: 898 WCGSGKKFKHCHGQIN 913