Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 903 a.a., preprotein translocase subunit SecA from Sinorhizobium meliloti 1021

 Score =  892 bits (2305), Expect = 0.0
 Identities = 480/910 (52%), Positives = 628/910 (69%), Gaps = 37/910 (4%)

Query: 8   KVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENLDQLLPEA 67
           K+ GS NDR +R  +  V  IN  E   +ALSDE L AKT EFR+ +  G+ LD +L  A
Sbjct: 10  KLFGSANDRRVRGYKGRVDAINALEAEMKALSDEALAAKTAEFRRELADGKTLDDILVPA 69

Query: 68  FATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNALPGKGVH 127
           FA VREA+ RV G+R FDVQLIGGM+LH   IAEM+TGEGKTL ATL  YLNAL GKGVH
Sbjct: 70  FAVVREAALRVLGLRPFDVQLIGGMILHERAIAEMKTGEGKTLVATLPVYLNALAGKGVH 129

Query: 128 IVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNNEFGFDYL 187
           +VTVNDYLA+RDA     ++ FLGMT GV +  +    +++AY  D+ Y TNNE GFDYL
Sbjct: 130 VVTVNDYLAQRDAGMMGRIYGFLGMTTGVIVHGLSDEQRRDAYACDVTYATNNELGFDYL 189

Query: 188 RDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRINKLIPLLQ 247
           RDNM +     VQR  FFA+VDEVDSIL+DEARTPLIISGP +D SDLY  IN+ IPLL 
Sbjct: 190 RDNMKYERGQMVQRGHFFAIVDEVDSILVDEARTPLIISGPLDDRSDLYNTINEFIPLLS 249

Query: 248 KQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANISLL 307
            +D E            +DEK +  + +E G E +E +L + G++ +G++LY   N++++
Sbjct: 250 PEDYE------------IDEKQRSANFSEEGTEKLENMLREAGLL-KGESLYDIENVAIV 296

Query: 308 HHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEAKEGVKIQ 367
           HHVN AL+AH LF ++ DYIV  +GE+VI+DE TGR MPGRR+S+G HQA+EAKE V+IQ
Sbjct: 297 HHVNNALKAHKLFTRDKDYIVR-NGEIVIIDEFTGRMMPGRRYSEGQHQALEAKEKVQIQ 355

Query: 368 NENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMVRNDMPDV 427
            ENQTLASITFQNYFR+Y+KL+GMTGTA TEA EF  IYGLE + +PTN P+ R D  D 
Sbjct: 356 PENQTLASITFQNYFRMYDKLAGMTGTAATEAEEFGNIYGLEVLEVPTNLPIKRIDEDDE 415

Query: 428 VYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGI-KHNVLNAKFHE 486
           VYR+  EKF AII++IK   E+GQP+LVGT SIEKSELL++ LKK+G  K  VLNA++HE
Sbjct: 416 VYRTVGEKFKAIIDEIKSAHERGQPMLVGTTSIEKSELLADMLKKSGFSKFQVLNARYHE 475

Query: 487 KEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEK-----LDNPTQEQID-AIKA 540
           +EA IVA+AG PGAVTIATNMAGRGTDI LGG+   ++++        P +E  + AI+ 
Sbjct: 476 QEAYIVAQAGVPGAVTIATNMAGRGTDIQLGGNPDMRIQQELADVEPGPEREAREKAIRE 535

Query: 541 EWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFT 600
           E +++ ++ L AGGL+++ TERHESRRIDNQLRGRSGRQGD G S+FYLS++D L+RIF 
Sbjct: 536 EVQKLKEKALAAGGLYVLATERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFG 595

Query: 601 SDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVV 659
           SDRM  ++Q  G+ EGEAI    +++++E+AQ+KVE RNFDIRK LL+YDDV NDQRKV+
Sbjct: 596 SDRMDGMLQKLGLKEGEAIVHPWINKALERAQKKVEARNFDIRKNLLKYDDVLNDQRKVI 655

Query: 660 YELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLP 719
           +E R ELM A+ ++D +   R +V+  ++ + IP ++  + WD +GL+  ++  F+L LP
Sbjct: 656 FEQRIELMDAESVTDTVTDMRNEVIEEIVAKRIPERAYAEKWDAEGLKADVQQYFNLDLP 715

Query: 720 IQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHL 779
           I  W+ A+  + E+ +RERI     +    + +   P +M+  E+SV+LQTLD LW+EH+
Sbjct: 716 IAEWV-AEEGIAEDDIRERITAAVDKAAAERAERFGPEIMQYVERSVVLQTLDHLWREHI 774

Query: 780 AAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQEEVER 839
             +DHLR  I  RGYAQ++P QEYK E+FELF+ LL +L+  V   L +V     E V  
Sbjct: 775 VNLDHLRSVIGFRGYAQRDPLQEYKSEAFELFQALLGNLRQAVTAQLMRV-----ELVRE 829

Query: 840 MEAQRRAQAEEAARHAQAQHASADDAEQDE---SNQPMVRDER------KVGRNEPCPCG 890
              + +      A H        D A+  E   +  P  RD        KV RNE CPCG
Sbjct: 830 APEEPQPLPPMQAHHIDPLTGEDDFAQAGETLLAVAPANRDPADPSTWGKVARNEACPCG 889

Query: 891 SGKKYKQCHG 900
           SGKKYK CHG
Sbjct: 890 SGKKYKHCHG 899