Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., protein translocase subunit SecA from Phaeobacter inhibens DSM 17395

 Score =  928 bits (2398), Expect = 0.0
 Identities = 486/912 (53%), Positives = 642/912 (70%), Gaps = 26/912 (2%)

Query: 2   ITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENLD 61
           I  L  KV G+ NDR ++  R ++ +IN  EP FE LSD++L+ KT E R+R   GE+LD
Sbjct: 4   IGTLAKKVFGTPNDRKIKATRPLIAKINALEPEFEKLSDQDLQDKTAELRKRALDGESLD 63

Query: 62  QLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNAL 121
            LLPEAFA VREA++R  G+R FD QL+GG+ LH G I+EM+TGEGKTL AT  AYLNAL
Sbjct: 64  DLLPEAFANVREAARRALGLRAFDTQLMGGIFLHQGNISEMKTGEGKTLVATFPAYLNAL 123

Query: 122 PGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNNE 181
            GKGVHIVTVN+YLAKRD+E    +F  LGMT GV     P   K  AYQ+D+ Y TNNE
Sbjct: 124 TGKGVHIVTVNEYLAKRDSEWMGKVFAQLGMTTGVIWSGQPDAEKMAAYQSDVTYATNNE 183

Query: 182 FGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRINK 241
            GFDYLRDNM    +   Q+   FA+VDEVDSILIDEARTPLIISGPAED S+LY  I+K
Sbjct: 184 LGFDYLRDNMKPSLDQVFQKHHNFAIVDEVDSILIDEARTPLIISGPAEDRSELYSTIDK 243

Query: 242 LIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSP 301
           LIPLL             D H+ +DEK++ V  TE G E++E+ L+ + +++EG +LY P
Sbjct: 244 LIPLL------------SDDHYELDEKTRGVTFTEDGNEYLEQQLIAHELLEEGASLYDP 291

Query: 302 ANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEAK 361
            + +++HHVN ALRAH LF+++ DYIV  DGEVV++DE TGR M GRR S+GLHQA+EAK
Sbjct: 292 ESTTVVHHVNQALRAHKLFQRDKDYIVR-DGEVVLIDEFTGRMMAGRRLSEGLHQAIEAK 350

Query: 362 EGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMVR 421
           E VKIQ EN TLAS+TFQNYFRLY KLSGMTGTA TEA EF +IYGL  V +PTN+P+ R
Sbjct: 351 EEVKIQPENTTLASVTFQNYFRLYGKLSGMTGTAMTEAEEFAEIYGLGVVEVPTNRPIAR 410

Query: 422 NDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVLN 481
            D  D VYR+  EK+ A+I + K+  E GQPVL+GT SIEKSELLS  L+K GIKHNVLN
Sbjct: 411 KDEDDQVYRTAMEKYQAMINETKKAHENGQPVLLGTTSIEKSELLSQLLQKEGIKHNVLN 470

Query: 482 AKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKV-EKLDNPTQEQIDAIKA 540
           A+ HE+EA+IVA+AG+ GAVTIATNMAGRGTDI LGG+ + KV E +        +AI+A
Sbjct: 471 ARHHEQEAQIVADAGRLGAVTIATNMAGRGTDIKLGGNVEFKVLEAIAETPDGDHEAIRA 530

Query: 541 EWKQVH----DQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLL 596
             ++ H    + V QAGGL ++ +ERHESRRIDNQLRGRSGRQGD G + FYLS+ED L+
Sbjct: 531 RIEEAHVADEEAVKQAGGLFVMASERHESRRIDNQLRGRSGRQGDPGRTVFYLSLEDDLM 590

Query: 597 RIFTSDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQ 655
           RIF S+R+  L+ + GM EGEAI    +++S+E+AQ KVEGRNFD+RK +L++DDV NDQ
Sbjct: 591 RIFGSERLDKLLSTLGMKEGEAIIHPWVNKSLERAQAKVEGRNFDMRKNVLKFDDVMNDQ 650

Query: 656 RKVVYELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFD 715
           RKV++  R E+M+A+D+S+++A  R +V++ ++D ++P ++  D WD +GL+++++    
Sbjct: 651 RKVIFNQRREIMAAEDLSEIVADMRHEVIDDLLDVHMPAKTYADQWDSEGLQEQVREKLG 710

Query: 716 LPLPIQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLW 775
           L +P+  W  A+  + +E +RER++E +      K +A  P  MRN EK V+LQT+D  W
Sbjct: 711 LDVPVVDWA-AEEGVDDEQIRERLVEVSDAKMVEKTEAFGPETMRNIEKQVLLQTIDAKW 769

Query: 776 KEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQE 835
           +EHL  ++HLR  +  RGYAQ++P  EYK ESF+LFE++L++L+  V   L+ VR   ++
Sbjct: 770 REHLLTLEHLRSVVGFRGYAQRDPLNEYKNESFQLFENMLDTLRETVTQQLAHVRPISED 829

Query: 836 EVERMEAQRRAQAEEAARHAQAQHASADDAEQDESNQPMVRDERKV----GRNEPCPCGS 891
           E  +M  Q  AQ  E  + A    A+   A Q+      V D+        RN+ CPCGS
Sbjct: 830 EQRQMMMQMAAQQAELQKAAAG--ANTSTALQEAPADGFVEDDPSTWGNPSRNDKCPCGS 887

Query: 892 GKKYKQCHGQIN 903
           GKK+K CHG ++
Sbjct: 888 GKKFKHCHGSLS 899