Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., carbamoyl phosphate synthase small subunit (RefSeq) from Shewanella amazonensis SB2B

 Score =  613 bits (1581), Expect = e-180
 Identities = 300/378 (79%), Positives = 332/378 (87%), Gaps = 1/378 (0%)

Query: 1   MSKSALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHI 60
           M+KSALLVLEDGT+F G +IGADGI+VGEVVFNTSMTGYQEILTDPSYS+QIVTLTYPHI
Sbjct: 1   MTKSALLVLEDGTLFSGTAIGADGIAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHI 60

Query: 61  GNTGTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTR 120
           GNTGTN ED ES+A+HA GL+IRDLPLIAS+FRS QSLSDYLK+ N+VGIADIDTRKLTR
Sbjct: 61  GNTGTNDEDTESSAVHACGLIIRDLPLIASSFRSTQSLSDYLKANNVVGIADIDTRKLTR 120

Query: 121 ILREKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGG 180
           ILREKGAQ GCI+ GD LD   ALA AK FPGLKGMDLAK V+T E Y W+ GSW LEGG
Sbjct: 121 ILREKGAQAGCILVGD-LDSDKALAAAKAFPGLKGMDLAKEVTTAERYQWRSGSWRLEGG 179

Query: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
           LP    +SEL + VVAYD+G K NILRMLVDRGC +TVVPA+T A +VLA+NPDGVFLSN
Sbjct: 180 LPSDTPESELKFKVVAYDYGVKTNILRMLVDRGCDVTVVPAKTPASEVLAMNPDGVFLSN 239

Query: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASGAKTVKMKFGHHGANHPVKDL 300
           GPGDPEPC YAI A +  L  +IPVFGICLGHQ+L LASGAKT+KMKFGHHGANHPV D+
Sbjct: 240 GPGDPEPCDYAIAAIQEILTTDIPVFGICLGHQLLGLASGAKTLKMKFGHHGANHPVGDV 299

Query: 301 DRGVVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEASPGP 360
           ++G VMITSQNHGFA DEATLP NL+ THKSLFDGSLQGIHRTDKPAFSFQGHPEASPGP
Sbjct: 300 EKGTVMITSQNHGFAVDEATLPANLKVTHKSLFDGSLQGIHRTDKPAFSFQGHPEASPGP 359

Query: 361 HDAAPLFDHFIELIKQFR 378
           HD APLFDHFIELI+++R
Sbjct: 360 HDCAPLFDHFIELIEEYR 377