Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., Carbamoyl-phosphate synthase, small subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  381 bits (978), Expect = e-110
 Identities = 201/374 (53%), Positives = 261/374 (69%), Gaps = 6/374 (1%)

Query: 4   SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
           +A+L L DGT+F G  +GA G  VGEV FNT+MTGYQE++TDPSY+ QIVT  +PHIGN 
Sbjct: 14  TAVLALADGTLFWGRGVGALGEVVGEVCFNTAMTGYQEVMTDPSYAGQIVTFCFPHIGNV 73

Query: 64  GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
           GTN+ED EST   A+G V+R      +N+R+  +L+ +L ++ +VGI+ +DTR+LTR +R
Sbjct: 74  GTNAEDIESTVPAARGCVLRADITEPANWRATGALNGWLAARGLVGISGVDTRQLTRRIR 133

Query: 124 EKGAQNGCIM-AGDNLDEALAL-AKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGGL 181
           + GA +G I  A D + +  AL AKA+ +PGL+GMDLA  V+  + YAW +  W+L+GG 
Sbjct: 134 DLGAPSGVIAHAADGVFDIPALVAKAQGWPGLEGMDLAAEVTCTQTYAWDETLWSLDGGY 193

Query: 182 PEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSNG 241
                 S+  +HVVA D+GAKRNILR L   GC++TVVPAQT+ ++V+A  PDG+FLSNG
Sbjct: 194 GRL---SDPRFHVVAIDYGAKRNILRNLASLGCKVTVVPAQTTLDEVMAHQPDGIFLSNG 250

Query: 242 PGDPEPC-TYAIEATRVFLEKNIPVFGICLGHQILALASGAKTVKMKFGHHGANHPVKDL 300
           PGDP    TYA+   +  +E   P+FGICLGHQ+LALA GA T KM  GH GANHPVKD 
Sbjct: 251 PGDPAATGTYAVPVIKQLIETGKPLFGICLGHQMLALALGATTYKMATGHRGANHPVKDH 310

Query: 301 DRGVVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEASPGP 360
             G V ITS NHGFA D A+LP  +  TH SLFD  L+G+    KP FS Q HPEASPGP
Sbjct: 311 TTGKVEITSMNHGFAVDRASLPAGVTETHTSLFDNVLEGLAVDGKPVFSVQYHPEASPGP 370

Query: 361 HDAAPLFDHFIELI 374
            D+  LF  F++L+
Sbjct: 371 EDSHYLFKRFVDLM 384