Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., carbamoyl-phosphate synthase small chain from Phaeobacter inhibens DSM 17395

 Score =  374 bits (959), Expect = e-108
 Identities = 198/374 (52%), Positives = 252/374 (67%), Gaps = 9/374 (2%)

Query: 4   SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
           +A L L DGT+F G   GA G +V E+ FNT+MTGYQEI+TDPSY+ QIVT T+PHIGNT
Sbjct: 10  TACLALADGTIFYGNGFGAYGETVAELCFNTAMTGYQEIMTDPSYAGQIVTFTFPHIGNT 69

Query: 64  GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
           G   ED+E+    A G+V++  P +ASN+R+ + L D+L   N + I  IDTR+LTR +R
Sbjct: 70  GVTPEDDETADPVAAGMVVKWDPTLASNWRATEELKDWLTRTNRIAIGGIDTRRLTRAIR 129

Query: 124 EKGAQNGCIM--AGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGGL 181
           + GA +  +      N D    +AKA+E+ GL+G+DLAK V+  ++Y W +  W      
Sbjct: 130 QLGAPHVALAHDPDGNFDIEALVAKAREWSGLEGLDLAKDVTCSQSYRWDEMRWAW---- 185

Query: 182 PEAKADSELPYH-VVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
           PE     E P H VVA D+GAKRNILR L   GC +TV+PA  +AE+VLA +PDGVFLSN
Sbjct: 186 PEGYTRQEAPKHKVVAIDYGAKRNILRCLASAGCDVTVLPASATAEEVLAHSPDGVFLSN 245

Query: 241 GPGDPEPC-TYAIEATRVFLEK-NIPVFGICLGHQILALASGAKTVKMKFGHHGANHPVK 298
           GPGDP     YA+   +  L+  ++P+FGICLGHQ+LALA G KTVKM  GHHGANHPVK
Sbjct: 246 GPGDPAATGEYAVPMIQQILDTTDLPMFGICLGHQMLALALGGKTVKMNHGHHGANHPVK 305

Query: 299 DLDRGVVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEASP 358
           +   G V ITS NHGFA D  +LPD +  TH SLFDGS  GI  +D+P +S Q HPEASP
Sbjct: 306 ENATGKVEITSMNHGFAVDGQSLPDGVEETHVSLFDGSNCGIRISDRPVYSVQHHPEASP 365

Query: 359 GPHDAAPLFDHFIE 372
           GP D+  LF+ F E
Sbjct: 366 GPQDSFYLFERFAE 379