Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  244 bits (624), Expect = 2e-69
 Identities = 152/391 (38%), Positives = 214/391 (54%), Gaps = 22/391 (5%)

Query: 3   KSALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGN 62
           ++  L+L+DG+ F G S G +    GEVVFNT+MTGY E LTDPSY+ Q++TLTYP +GN
Sbjct: 2   RNVTLILDDGSRFSGKSFGYEKPVAGEVVFNTAMTGYPESLTDPSYAGQLMTLTYPLVGN 61

Query: 63  TGTN---------SEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADI 113
            G           +   ES  IHA+ +++ D     S++ + +SL D+LK + + GI  I
Sbjct: 62  YGVPPFTIEPNGLATFMESEKIHAEAIIVSDYSSEYSHWNAVESLGDWLKREKVPGITGI 121

Query: 114 DTRKLTRILREKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKE--AYAWK 171
           DTR+LT+ILRE G   G I+  D +   +   +         ++    VS KE  +Y   
Sbjct: 122 DTRELTKILREHGVMMGRIVFDDEIVGEIDNGQL-TMDNYAAVNYVDRVSCKEIISYLPD 180

Query: 172 QGSWTLEGGLPEAKADSEL------PYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSA 225
             S         A+ +S+L         VV  D G K NI+R L+ RG  +  VP     
Sbjct: 181 GTSQCFPLSTSIAQLNSQLLTFNSQLKKVVLVDCGVKTNIIRCLLRRGVEVIRVPWD--- 237

Query: 226 EDVLALNPDGVFLSNGPGDPEPCTYAIEATR-VFLEKNIPVFGICLGHQILALASGAKTV 284
            D   L  DG+F+SNGPGDP+ C  A++  R     + +P+FGIC+G+Q+L+ A GAK  
Sbjct: 238 YDFNGLEFDGLFISNGPGDPDTCDAAVQNIRKAMANEKLPIFGICMGNQLLSKAGGAKIY 297

Query: 285 KMKFGHHGANHPVKDLDRGVVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTD 344
           K+K+GH   N PV+ +      ITSQNHG+A D  TL  +      ++ DGS +GI    
Sbjct: 298 KLKYGHRSHNQPVRMVGTERCFITSQNHGYAVDNNTLGADWEPLFINMNDGSNEGIKHKK 357

Query: 345 KPAFSFQGHPEASPGPHDAAPLFDHFIELIK 375
            P FS Q HPEA+ GP D   LFD F+ L+K
Sbjct: 358 NPWFSAQFHPEAASGPTDTEFLFDEFVNLLK 388