Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1097 a.a., carbamoyl phosphate synthase large subunit from Synechococcus elongatus PCC 7942

 Score = 1228 bits (3176), Expect = 0.0
 Identities = 631/1078 (58%), Positives = 795/1078 (73%), Gaps = 34/1078 (3%)

Query: 1    MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MP+R DI+ IL+LG+GPIVIGQACEFDYSG QACKALREEGY V+LVNSNPATIMTDPE 
Sbjct: 1    MPRRQDIRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPET 60

Query: 61   ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA 120
            AD TYIEP+  E+V ++IE+ERPDA+LPTMGGQTALN A+AL K+G L  FGVE+IGA  
Sbjct: 61   ADRTYIEPLTPELVAQVIERERPDALLPTMGGQTALNLAVALAKNGTLDRFGVELIGAKL 120

Query: 121  DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVG-FPCIIRPSFTMGGSGG 179
            +AI+KAEDR  F +AM+ IG++   +  A +M EA  + + +G +P IIRP+FTMGG+GG
Sbjct: 121  EAIEKAEDRLLFKEAMERIGVKVCPSGIANNMAEAQAIAEQIGTYPLIIRPAFTMGGTGG 180

Query: 180  GIAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDP 239
            GIAYN+EEFE I   GLD SP +++L+++SLIGWKE+E+EV+RD  DN +I+C+IEN DP
Sbjct: 181  GIAYNQEEFELIVQSGLDASPVSQILVEQSLIGWKEFELEVMRDLADNVVIICSIENLDP 240

Query: 240  MGIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIE 299
            MG+HTGDSITVAPAQTLTDKEYQ +R+ ++A++REIGVETGGSN+QF INP+DG +++IE
Sbjct: 241  MGVHTGDSITVAPAQTLTDKEYQRLRDQAIAIIREIGVETGGSNIQFAINPQDGDVIVIE 300

Query: 300  MNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKI 359
            MNPRVSRSSALASKATGFPIAK+AAKLAVG++LDEL NDIT   TPASFEPTIDYVVTKI
Sbjct: 301  MNPRVSRSSALASKATGFPIAKIAAKLAVGYSLDELKNDITR-QTPASFEPTIDYVVTKI 359

Query: 360  PRFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDLDAPD 419
            PRF FEKF G   +LTT MKSVGE MAIGR   ES QKALR LE+G +G       D P+
Sbjct: 360  PRFAFEKFPGTPAQLTTMMKSVGEAMAIGRTFPESFQKALRSLEIGRSGWG----CDRPE 415

Query: 420  ALT---KIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEV 476
             L    +I+ +L+    +RI+ +  A   G+S   ++ LT ID WFL +  E+++ E  +
Sbjct: 416  TLPTLEQIKPQLRTPSPDRIFAVRQAMLLGLSDGDIYQLTGIDPWFLEKFREILEGEDFL 475

Query: 477  KAGGFAGLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEF 536
            K      +      ++K+ GFSD +++  LG SE  +R+ R Q  I PVYK VDTCAAEF
Sbjct: 476  KRASIEQITPAQWLEVKQLGFSDRQIAFALGSSEEAVRQRRQQQGIKPVYKLVDTCAAEF 535

Query: 537  KSDTAYMYSTYDE---------------ECEANPTDKDKIMVLGGGPNRIGQGIEFDYCC 581
            ++ T Y YS Y+                E E  P+D+ K+M+LGGGPNRIGQGIEFDYCC
Sbjct: 536  EAYTPYYYSCYESPRSHLAESGLTTIPAESEVRPSDRPKVMILGGGPNRIGQGIEFDYCC 595

Query: 582  VHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQY 641
             HAA AL  DGYETIMVN NPETVSTDYDTSDRLYFEP+T EDVL I+  E+P+GVI+Q+
Sbjct: 596  CHAAFALAADGYETIMVNSNPETVSTDYDTSDRLYFEPLTREDVLNILEAERPQGVIIQF 655

Query: 642  GGQTPLKLARALE---------AAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNA 692
            GGQTPLKLA  L+         A G  + GTSPD+ID AEDRERF+Q +++L + QP N 
Sbjct: 656  GGQTPLKLAVPLQTFLQTPEGQALGTQIWGTSPDSIDTAEDRERFEQILRQLDIAQPANG 715

Query: 693  TVTAIEQAIEKSREIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLD 752
               + E+A+  +  IG+P VVRPSYVLGGRAMEIVY + +L RY  EAV V  + P+L+D
Sbjct: 716  LARSPEEALAIAHRIGYPTVVRPSYVLGGRAMEIVYSDAELERYMTEAVQVEPDHPILID 775

Query: 753  RFLDDATEVDVDAICDGE-RVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQ 811
            +FL++A EVDVDA+ D   +VVIGGIMEHIEQAG+HSGDSACSLP  +L++ + + +R  
Sbjct: 776  KFLENAIEVDVDALADRTGQVVIGGIMEHIEQAGIHSGDSACSLPTVSLNETVLETIRAW 835

Query: 812  VEKLAFELGVRGLMNIQFAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQ 871
              +LA  L V GLMNIQFAVKD +VY++E NPRA+RTVPFVSKA G PLAKIAAR+M GQ
Sbjct: 836  TTQLAKALNVIGLMNIQFAVKDEQVYILEANPRASRTVPFVSKAIGRPLAKIAARLMSGQ 895

Query: 872  TLEQQGFTKEIIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAE 931
            TL   G T E++P Y SVKE VLPF++FPG D LLGPEMRSTGEVMG+   F  A+AKAE
Sbjct: 896  TLADLGITSELVPSYLSVKEAVLPFDRFPGTDTLLGPEMRSTGEVMGIDVDFGRAFAKAE 955

Query: 932  LGCGSVYPEGGRALLSVREGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVN 991
            L      P  G   +SV + DK  +  +A + ++LG+++ AT GT  +L E  ++   + 
Sbjct: 956  LAASQRLPRQGTVFISVSDRDKAAIGPIAREFLQLGFRVVATGGTQKVLAEQRLSVEPIL 1015

Query: 992  KVHEGRPHILDRIKNHEYTYIVNTASGRQAIEDSKVLRRGALAHKVNYTTTLNAAFAT 1049
            KVHEGRPH+LD +KN +   I+NT +G +A  D +++RR AL +KV   TT+  A AT
Sbjct: 1016 KVHEGRPHVLDALKNDQIQLIINTPAGARAKVDDQIIRRAALDYKVPTVTTIAGAKAT 1073