Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1163 a.a., carbamoyl phosphate synthase large subunit from Sinorhizobium meliloti 1021

 Score = 1256 bits (3251), Expect = 0.0
 Identities = 673/1162 (57%), Positives = 820/1162 (70%), Gaps = 96/1162 (8%)

Query: 1    MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKR DI+SILI+GAGPIVIGQACEFDYSG QACKAL+EEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA 120
            ADATY+EPI  EVV KII KERPDA+LPTMGGQTALN AL+L + GVL  + VEMIGA  
Sbjct: 61   ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLRRMGVLDRYNVEMIGAKP 120

Query: 121  DAIDKAEDRSRFDKAMKSIGLECPRADTA------------------------------K 150
            +AIDKAEDR+ F +AM  IGLE P++  A                              K
Sbjct: 121  EAIDKAEDRALFREAMAHIGLETPKSRLANATDIKDHDRKSHEAERSALKAKLSGDELDK 180

Query: 151  SMEE-----------------------AYKVLDMVGFPCIIRPSFTMGGSGGGIAYNREE 187
            +++E                       A + LD VG P IIRPSFT+GG+GGGIAYNR E
Sbjct: 181  ALDELENQWNLGEGDRKQRYVNHAMAIAAQALDDVGLPAIIRPSFTLGGTGGGIAYNRSE 240

Query: 188  FEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMGIHTGDS 247
            F EI   GLD SPT E+LI+ES++GWKEYEMEVVRDK DNCII+C+IEN DPMG+HTGDS
Sbjct: 241  FFEIVGSGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS 300

Query: 248  ITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPRVSRS 307
            ITVAPA TLTDKEYQIMRNAS+AVLREIGVETGGSNVQF +NP++GR+V+IEMNPRVSRS
Sbjct: 301  ITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPENGRLVVIEMNPRVSRS 360

Query: 308  SALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPRFNFEKF 367
            SALASKATGFPIAK+AAKLAVG+TLDEL NDITGGATPASFEP+IDYVVTKIPRF FEKF
Sbjct: 361  SALASKATGFPIAKIAAKLAVGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF 420

Query: 368  AGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDL----DAPDALTK 423
             GA   LTT MKSVGEVMAIGR   ESLQKALRGLE G  GLDE +++    D  D    
Sbjct: 421  PGAEPTLTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDE-IEVPDFDDNGDGRNA 479

Query: 424  IRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKAGGFAG 483
            IR  L     +R+  +A A R GMS   V     ID WF+ Q + +V +EA ++  G   
Sbjct: 480  IRAALGTPTPDRLRMVAQALRLGMSEAEVHEACKIDPWFIAQFKAIVDMEARIREHGLPA 539

Query: 484  LNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEFKSDTAYM 543
             + + LR +K  GFSDARL+ L G    E+  LR+  N+ PVYKR+DTCAAEF S TAYM
Sbjct: 540  -DAENLRMLKAMGFSDARLATLTGKRPKEVAELRNALNVRPVYKRIDTCAAEFASPTAYM 598

Query: 544  YSTYD------EECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597
            YSTY+         EA  +D+ K+++LGGGPNRIGQGIEFDYCC HAA AL++ GYE IM
Sbjct: 599  YSTYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGYEAIM 658

Query: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPK----GVIVQYGGQTPLKLARAL 653
            +NCNPETVSTDYDTSDRLYFEP+T EDV+ I+R E+      GVIVQ+GGQTPLKLA AL
Sbjct: 659  INCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQENGTLHGVIVQFGGQTPLKLAEAL 718

Query: 654  EAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVV 713
            E  G+P++GT+PDAID AEDR+RFQ+ + +L L QP+N    ++EQA   + EIGFPLVV
Sbjct: 719  EKNGIPILGTAPDAIDLAEDRDRFQKLLMKLDLNQPNNGIAYSVEQARLVAGEIGFPLVV 778

Query: 714  RPSYVLGGRAMEIVYDEQDLRRYFNEAV---------------------SVSNESPVLLD 752
            RPSYVLGGRAM+I++ E  L+ Y  + V                     ++  ++P+L D
Sbjct: 779  RPSYVLGGRAMQIIHSESMLQSYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFD 838

Query: 753  RFLDDATEVDVDAICDGERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQV 812
             +L +A EVDVD +CDG+ V + GIMEHIE+AG+HSGDSACSLP ++L  ++ D++  Q 
Sbjct: 839  SYLTNAIEVDVDCLCDGKDVFVSGIMEHIEEAGIHSGDSACSLPVHSLGTDMVDELERQT 898

Query: 813  EKLAFELGVRGLMNIQFAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQT 872
              LA  L V GLMN+QFA+KD  +Y++EVNPRA+RTVPFV+K  GAP+AKIAARVM G+ 
Sbjct: 899  GALARALNVGGLMNVQFAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEM 958

Query: 873  LEQ--QGFTKEIIP---PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAY 927
            L++    + K+  P    + +VKE V PF +FPGVD LLGPEMRSTGEV+G+   +A A+
Sbjct: 959  LDEAIAAYGKKPNPRNLKHIAVKEAVFPFARFPGVDTLLGPEMRSTGEVIGLDTDYALAF 1018

Query: 928  AKAELGCGSVYPEGGRALLSVREGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGINP 987
            AK++LG G   P  G   +SVR+ DK+RV+     L  +G+++ AT GTA  LGE GI  
Sbjct: 1019 AKSQLGAGVDLPRDGTVFVSVRDEDKERVLPAIRILSDIGFKVMATGGTARFLGEQGIVA 1078

Query: 988  RLVNKVHEGRPHILDRIKNHEYTYIVNTASGRQAIEDSKVLRRGALAHKVNYTTTLNAAF 1047
              +NKV EGRPH+ D I+N +   ++NT  G +AI DSK LRR  L  KV Y TT+  A 
Sbjct: 1079 TKINKVLEGRPHVEDAIRNRQVQLVINTTDGNKAISDSKSLRRATLMQKVPYYTTMAGAE 1138

Query: 1048 ATCMSHTADAKASVTSVQELHA 1069
            A  ++  A  KA    V+ L +
Sbjct: 1139 AAALAIKA-LKAGNLEVRPLQS 1159