Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) from Shewanella amazonensis SB2B

 Score = 70.1 bits (170), Expect = 5e-16
 Identities = 61/246 (24%), Positives = 102/246 (41%), Gaps = 38/246 (15%)

Query: 650 ARALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQ------PDNATVTAIEQAIEK 703
           ARA EA+G+  +G   DAID    +   +  +++ G+         D +  T + +A   
Sbjct: 92  ARACEASGIAFVGPGSDAIDAMGSKSAAKLIMEKAGVPLVPGYHGDDQSDATLLAEA--- 148

Query: 704 SREIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFN----EAVSVSNESPVLLDRFLDDAT 759
            ++IG+PL+++ +Y  GG+ M IV  E +L+   +    EA S      +L++R+L    
Sbjct: 149 -KKIGYPLLIKAAYGGGGKGMRIVESESELKAAIDSARREAASSFGNDKLLMERYLRQPR 207

Query: 760 EVDVDAICDGERVVIGGIMEHIEQAGVHSGDSACSL-----------PAYTLSQEIQDKM 808
            V+V    D +               V+  D  CS+           PA  L   ++ +M
Sbjct: 208 HVEVQVFADSQGNC------------VYLSDRDCSIQRRHQKVVEEAPAPGLPDSLRKQM 255

Query: 809 REQVEKLAFELGVRGLMNIQFAVK-DNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARV 867
            E     A  +  RG   ++F +  D   + +E+N R     P     TG  L K    V
Sbjct: 256 GEAAVAAAKAIDYRGAGTVEFLLDVDMSFFFMEMNTRLQVEHPVTEMVTGQDLVKWQLLV 315

Query: 868 MVGQTL 873
             G  L
Sbjct: 316 AAGAQL 321



 Score = 50.4 bits (119), Expect = 4e-10
 Identities = 73/324 (22%), Positives = 129/324 (39%), Gaps = 34/324 (10%)

Query: 30  GAQACKALR---EEGYRVILVNSNPATIMTDPEMADATYI--------EPIHWEVVRKII 78
           G  AC+ +R   + G + + V S+         +AD ++           +  E++  I 
Sbjct: 11  GEIACRVIRTARDMGIKTVAVYSDADRDARHVALADESFYLGESAPASSYLRGELIIDIA 70

Query: 79  EKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATADAIDKAEDRSRFDKAMKS 138
           +K   +AI P  G  +  N A A          G+  +G  +DAID    +S     M+ 
Sbjct: 71  KKCGAEAIHPGYGFLSE-NAAFAR----ACEASGIAFVGPGSDAIDAMGSKSAAKLIMEK 125

Query: 139 IGLECPRADTAKSMEEAYKVLDM--VGFPCIIRPSFTMGGSGGGIAYNREEFE---EICT 193
            G+            +A  + +   +G+P +I+ ++  GG G  I  +  E +   +   
Sbjct: 126 AGVPLVPGYHGDDQSDATLLAEAKKIGYPLLIKAAYGGGGKGMRIVESESELKAAIDSAR 185

Query: 194 RGLDLSPTNE-LLIDESLIGWKEYEMEVVRDKNDNCIIV----CAIENFDPMGIHTGDSI 248
           R    S  N+ LL++  L   +  E++V  D   NC+ +    C+I+            +
Sbjct: 186 REAASSFGNDKLLMERYLRQPRHVEVQVFADSQGNCVYLSDRDCSIQR------RHQKVV 239

Query: 249 TVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPRVSRSS 308
             APA  L D   + M  A++A  + I    G   V+F ++  D     +EMN R+    
Sbjct: 240 EEAPAPGLPDSLRKQMGEAAVAAAKAIDYR-GAGTVEFLLD-VDMSFFFMEMNTRLQVEH 297

Query: 309 ALASKATGFPIAKVAAKLAVGFTL 332
            +    TG  + K    +A G  L
Sbjct: 298 PVTEMVTGQDLVKWQLLVAAGAQL 321