Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1119 a.a., carbamoyl-phosphate synthase large chain from Phaeobacter inhibens DSM 17395

 Score = 1269 bits (3285), Expect = 0.0
 Identities = 681/1118 (60%), Positives = 811/1118 (72%), Gaps = 63/1118 (5%)

Query: 1    MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKRTDIQSI+I+GAGPI+IGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRTDIQSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA 120
            ADATYIEPI  EVV KIIEKERPDA+LPTMGGQT LN ALALE+ GVLA+F VEMIGA  
Sbjct: 61   ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTALALEEMGVLAKFDVEMIGAKR 120

Query: 121  DAIDKAEDRSRFDKAMKSIGLECPRA-------------DTAKSMEEAYKVLDMVGFPCI 167
            +AI+ AEDR  F +AM  +GLE PRA             D    ++ A   L+ +G P I
Sbjct: 121  EAIEMAEDRKLFREAMDRLGLENPRATIITAPKKDNGNADLDAGVQMALDELEDIGLPAI 180

Query: 168  IRPSFTMGGSGGGIAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDN 227
            IRP+FT+GG+GGG+AYNRE++   C  G+D SP N++L+DESL+GWKEYEMEVVRD  DN
Sbjct: 181  IRPAFTLGGTGGGVAYNREDYIHFCRSGMDASPVNQILVDESLLGWKEYEMEVVRDTADN 240

Query: 228  CIIVCAIENFDPMGIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFG 287
             IIVC+IEN DPMG+HTGDSITVAPA TLTDKEYQ+MR+AS+AVLREIGVETGGSNVQ+ 
Sbjct: 241  AIIVCSIENIDPMGVHTGDSITVAPALTLTDKEYQMMRSASIAVLREIGVETGGSNVQWA 300

Query: 288  INPKDGRMVIIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPAS 347
            +NP DGRMV+IEMNPRVSRSSALASKATGFPIAK+AAKLAVGFTLDEL NDITG  TPAS
Sbjct: 301  VNPADGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELDNDITG-VTPAS 359

Query: 348  FEPTIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAA 407
            FEPTIDYVVTKIPRF FEKFAG+   LTT MKSVGE MAIGR   ESLQKAL  +E G  
Sbjct: 360  FEPTIDYVVTKIPRFAFEKFAGSEPYLTTAMKSVGETMAIGRTIHESLQKALASMETGLT 419

Query: 408  GLDEKV---DLDAPDALTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLV 464
            G DE       D  D    +   + +   +R+  IA A R G+S D +  +T  D WFL 
Sbjct: 420  GFDEVAIPGAEDETDGKAAVIKAISQQTPDRMRTIAQAMRHGLSDDDIHAVTKFDPWFLA 479

Query: 465  QIEELVKLEAEVKAGGFAGLNQDV--LRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNI 522
            +I E+V+ EA+++A    GL QD   LR +K  GF+DARL+ L    E +IR  R    +
Sbjct: 480  RIREIVEAEAKIRA---EGLPQDEHGLRAIKMLGFTDARLAMLTDQREGDIRAARRALGV 536

Query: 523  HPVYKRVDTCAAEFKSDTAYMYSTY------DEECEANPTDKDKIMVLGGGPNRIGQGIE 576
            + V+KR+DTCAAEF++ T YMYSTY      D ECEA P+DK K+++LGGGPNRIGQGIE
Sbjct: 537  NAVFKRIDTCAAEFEAQTPYMYSTYEAPAFGDVECEARPSDKKKVVILGGGPNRIGQGIE 596

Query: 577  FDYCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKG 636
            FDYCC HA  AL + GYETIM+NCNPETVSTDYDTSDRLYFEP+T E V+ I+  E   G
Sbjct: 597  FDYCCCHACFALTDAGYETIMINCNPETVSTDYDTSDRLYFEPLTFEHVMEILTKELENG 656

Query: 637  ----VIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNA 692
                VIVQ+GGQTPLKLA ALE  G+P++GTSPDAID AEDRERFQ  V +LGLKQP N 
Sbjct: 657  TLHGVIVQFGGQTPLKLANALEEEGIPILGTSPDAIDLAEDRERFQALVNQLGLKQPHNG 716

Query: 693  TVTAIEQAIEKSREIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLD 752
              +   QA+E + EIGFPLV+RPSYVLGGRAMEIV D   L+RY  EAV VS +SPVLLD
Sbjct: 717  IASTDAQALEIAEEIGFPLVIRPSYVLGGRAMEIVRDMDQLKRYIAEAVVVSGDSPVLLD 776

Query: 753  RFLDDATEVDVDAICDGERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQV 812
             +L  A E+DVDAICDG  V + GIM+HIE+AGVHSGDSACSLP Y+LS+E+  +++ Q 
Sbjct: 777  SYLSGAVELDVDAICDGTEVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEVIAEVKTQT 836

Query: 813  EKLAFELGVRGLMNIQFAVKDNE-----VYLIEVNPRAARTVPFVSKATGAPLAKIAARV 867
              LA  L V GLMNIQFAVK +      +YLIEVNPRA+RTVPFV+K+T + +A IAARV
Sbjct: 837  NALAKALNVVGLMNIQFAVKPDADGKDVIYLIEVNPRASRTVPFVAKSTDSAIASIAARV 896

Query: 868  MVGQTLEQQGFTKEI-----------IP------------PYYSVKEVVLPFNKFPGVDP 904
            M G+ L    F K             +P            P++SVKE VLPF +FPGVD 
Sbjct: 897  MAGEPLSN--FPKRAPYEPDAGYDVNVPMADPMTLADPDMPWFSVKEAVLPFARFPGVDT 954

Query: 905  LLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDK-QRVVDLASKL 963
            LLGPEMRSTGEVMG   +FA A+ KA++G G V P  GRA +S+++ DK   ++D A  L
Sbjct: 955  LLGPEMRSTGEVMGWDRSFARAFLKAQMGAGMVLPSEGRAFISIKDADKGTLMLDAAKIL 1014

Query: 964  VKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNHEYTYIVNTASGRQAIE 1023
            V+ G+ L AT GT   L   G+   LVNKV+EGRPH++D +K+     ++NT  G QA++
Sbjct: 1015 VEQGFTLVATRGTQSWLDGHGVPCELVNKVYEGRPHVVDMLKDGNVQLLMNTTEGAQAVQ 1074

Query: 1024 DSKVLRRGALAHKVNYTTTLNAAFATCMSHTADAKASV 1061
            DSK +R  AL  K+ Y TT   A A   +  A A+  V
Sbjct: 1075 DSKDMRSVALYDKIPYFTTAAGANAAARAIKAQAEGDV 1112