Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1081 a.a., carbamoyl-phosphate synthase large subunit from Methanococcus maripaludis JJ

 Score = 1062 bits (2746), Expect = 0.0
 Identities = 555/1083 (51%), Positives = 758/1083 (69%), Gaps = 23/1083 (2%)

Query: 3    KRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62
            KR DI+ ++ILG+GPIVIGQA EFD+SG+QACK+L+EEG   ILVNSNPATI TD  +AD
Sbjct: 2    KREDIKKVMILGSGPIVIGQAAEFDFSGSQACKSLKEEGIYTILVNSNPATIQTDTNIAD 61

Query: 63   ATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATADA 122
              Y+EP++ +++ KIIEKE+PDAILPTMGGQT LN A+ L K G+L + GVE++G+T   
Sbjct: 62   KVYLEPLNPKILEKIIEKEQPDAILPTMGGQTGLNLAMELSKRGILEKHGVELLGSTESV 121

Query: 123  IDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGGIA 182
            I+ +EDR  F+KAM+ I     ++    S+EEA +    +G+P I+RP+FT+GG+GGGIA
Sbjct: 122  IETSEDRDLFNKAMEEINQPIAKSAAVHSVEEAIEATKELGYPAIVRPAFTLGGTGGGIA 181

Query: 183  YNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMGI 242
             N +E  EI  +GL  S   ++LID+SL+GWKEYE EV+RDKND CI+VC +EN DPMGI
Sbjct: 182  NNEDELIEITKKGLKYSMIKQVLIDQSLLGWKEYEYEVMRDKNDTCIVVCNMENIDPMGI 241

Query: 243  HTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMNP 302
            HTG+SI  AP+QTL+D+ +Q +R+ASL ++R + +E GG NVQF +NP+    V+IE+NP
Sbjct: 242  HTGESIVTAPSQTLSDEFHQKLRDASLQIIRHLKIE-GGCNVQFAVNPEMTDYVVIEVNP 300

Query: 303  RVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPRF 362
            RVSRSSALASKATG+PIAK+AAK+A+G TLDE+ ND+T   TPASFEPTIDYVV KIPR+
Sbjct: 301  RVSRSSALASKATGYPIAKIAAKIAIGRTLDEIQNDVTK-ETPASFEPTIDYVVVKIPRW 359

Query: 363  NFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGL--DEKVDLDAPDA 420
             F+KF   + +L T MKS GE+MAIGRN +E+LQKA+R L++G  G+  D K   D   +
Sbjct: 360  PFDKFRTVDKKLGTSMKSTGEIMAIGRNLEEALQKAVRSLDIGRFGIIADGK---DKEYS 416

Query: 421  LTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKAGG 480
             ++I   L+ A  ER++ IA A   G SVDG+   T I+ +F+ +I++++  + E++   
Sbjct: 417  NSEIVDILEHATDERLFVIAYALDKGWSVDGICERTGINPFFIEKIKKIIDCKKELEVIS 476

Query: 481  FAGLN----QDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEF 536
               ++    +++L K K  GFSD ++SK+   +ENEIR LR +  + PVYK VDTCAAEF
Sbjct: 477  RLPVDDEKLKEILLKAKSLGFSDVQISKIFSKTENEIRDLRKRLEVIPVYKMVDTCAAEF 536

Query: 537  KSDTAYMYSTYD-----EECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALRED 591
            ++ T Y YS Y+     E+ E+  +D+ K+++LG GP RIGQG+EFDY  VHA  AL+E 
Sbjct: 537  EAKTPYYYSAYERYFDKEQNESVSSDRKKVIILGSGPIRIGQGVEFDYSTVHAIFALKEL 596

Query: 592  GYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKG----VIVQYGGQTPL 647
            G E I+VN NPETVSTDYDTSD+LYFEP+  E+++ I+  E   G    VIVQ+GGQT +
Sbjct: 597  GIEAIIVNNNPETVSTDYDTSDKLYFEPLVYEEIMNIIENENKNGQLLGVIVQFGGQTAI 656

Query: 648  KLARALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREI 707
             LA  L  +GV ++GTSP +ID AEDR++F   +++L + Q D AT  + EQA++    I
Sbjct: 657  NLAMKLYNSGVNILGTSPQSIDLAEDRDQFIHVLEKLKIPQADGATAFSEEQALKVVERI 716

Query: 708  GFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAIC 767
            G+P +VRPSYVLGGRAM+IVY+ +DL+ Y  EAV VS++ P+L+D+FL++A EVDVDA+C
Sbjct: 717  GYPALVRPSYVLGGRAMQIVYNTEDLKDYMREAVKVSSDHPILIDKFLEEAVEVDVDAVC 776

Query: 768  DGERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNI 827
            DGE V IG IMEHIE+AG+HSGDSAC +P  TLS+E+ +K+ E   KLA ELGV GL+NI
Sbjct: 777  DGESVFIGAIMEHIEEAGIHSGDSACVIPPQTLSKEVIEKIAEHTTKLALELGVIGLLNI 836

Query: 828  QFAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYY 887
            Q+AVKD  VY+IE NPRA+RT+P+VSK+ G PLAKIA   ++G+ L++  +       Y 
Sbjct: 837  QYAVKDGVVYIIEANPRASRTIPYVSKSVGVPLAKIATNAIMGKKLKEMRYFGLAKSKYV 896

Query: 888  SVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLS 947
            SVKE V PF K PGVDP+L PEM+STGE +G+   F +A+ K++L      P  G   +S
Sbjct: 897  SVKEAVFPFLKLPGVDPVLSPEMKSTGEAIGIDQDFGKAFYKSQLSANMELPTSGTVFIS 956

Query: 948  VREGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPH-ILDRIKN 1006
            VR  DK  +  +A K   LG+++ AT GTA  L    I  R V K+ E   + +LD ++ 
Sbjct: 957  VRNRDKDNITKIAKKYHNLGFEIVATRGTARELRLFDIPVREVRKISESMQNSVLDLMQK 1016

Query: 1007 HEYTYIVNTASGRQAIEDSKVLRRGALAHKVNYTTTLNAAFATCMSHTA--DAKASVTSV 1064
             E   I+NT+SG +A  D   +RR A+   +   TTL  A+A   +  A    +  V S+
Sbjct: 1017 GEVDLIINTSSGDKAKTDGYFIRRAAVELNIPCMTTLQGAYAAIKAIEAIKSGELGVYSL 1076

Query: 1065 QEL 1067
             EL
Sbjct: 1077 NEL 1079