Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., carbamoyl-phosphate synthase, large subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 1256 bits (3251), Expect = 0.0
 Identities = 645/1077 (59%), Positives = 806/1077 (74%), Gaps = 11/1077 (1%)

Query: 1    MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKRTD++ I+++G+GPI+IGQACEFDYSG QA KAL+EEGY V+LVNSNPATIMTDP +
Sbjct: 1    MPKRTDLKRIMVIGSGPIIIGQACEFDYSGTQAVKALKEEGYEVVLVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA 120
            AD TYIEPI  E V  II KERPDA+LPT+GGQT LN ALAL   GVL E GVE+IGA  
Sbjct: 61   ADRTYIEPIEPETVAAIIRKERPDALLPTLGGQTGLNTALALAASGVLDECGVELIGANR 120

Query: 121  DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGG 180
              I+KAE R  F  AM +IGL+ P +  A+SM++  ++   + FP IIRP+FTMGG+GGG
Sbjct: 121  AVIEKAESRELFRLAMANIGLKVPASGIARSMDDVRRLGTEMPFPLIIRPAFTMGGTGGG 180

Query: 181  IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM 240
            IAYN E+ EEI +RGL  S T+E++I++S++GWKEYEMEV+RDK DNC+I+C+IENFDPM
Sbjct: 181  IAYNMEDLEEIASRGLTASITSEVMIEQSVLGWKEYEMEVMRDKADNCVIICSIENFDPM 240

Query: 241  GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM 300
            G+HTGDSITVAPAQTLTD EYQ+MR+AS+A++REIGVETGGSNVQFGINP +G MV+IEM
Sbjct: 241  GVHTGDSITVAPAQTLTDVEYQMMRDASIAIMREIGVETGGSNVQFGINPDNGDMVVIEM 300

Query: 301  NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP 360
            NPRVSRSSALASKATGFPIAK+AAKLAVG+TLDE+ NDIT   T ASFEPTIDYVVTKIP
Sbjct: 301  NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDIT-RETMASFEPTIDYVVTKIP 359

Query: 361  RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDLDAPDA 420
            RF FEKF GA D LTT MKSVGE M+IGR  +ESLQK LR LEVGA GL  +     P+ 
Sbjct: 360  RFTFEKFPGARDELTTAMKSVGEAMSIGRTFKESLQKGLRSLEVGAPGLGSRFRDKLPEH 419

Query: 421  LTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKAGG 480
              +I  +L+   + RI+Y+  A  +GM++D +  +TNID WFL Q+ ELV +E +++   
Sbjct: 420  -EEIVAKLRTPNSRRIFYVRLAMLSGMTIDDIHEITNIDPWFLRQMRELVDMEGDLRDFA 478

Query: 481  FA-------GLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCA 533
             A       G    +LR+ K  GFSD +L+++    E+++R LRD   I P Y  VDTCA
Sbjct: 479  LANSMTPDNGELVTLLRRAKEYGFSDRQLAEMWKRPESDVRALRDATGIRPTYYLVDTCA 538

Query: 534  AEFKSDTAYMYSTYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGY 593
            +EF++ T Y YSTY+   E     + K+++LGGGPNRIGQGIEFDYCC HA+ AL+E G 
Sbjct: 539  SEFEAYTPYYYSTYETGHEIEAESRRKVIILGGGPNRIGQGIEFDYCCCHASFALKEMGV 598

Query: 594  ETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLARAL 653
            + IMVN NPETVSTDYDTSDRLYFEP+T EDV+ I+  EKP GVIVQ+GGQTPL LA  L
Sbjct: 599  QAIMVNSNPETVSTDYDTSDRLYFEPLTFEDVMHIIEAEKPDGVIVQFGGQTPLNLAVPL 658

Query: 654  EAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVV 713
            + AGVP++GTSPDAIDRAEDRERFQ  + +L L+QP NATV  + QAI  +  IG+P+VV
Sbjct: 659  QRAGVPILGTSPDAIDRAEDRERFQALIHKLDLRQPANATVMNLRQAIAGANSIGYPVVV 718

Query: 714  RPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGERVV 773
            RPSYVLGGRAMEIVYDE+ L  YF  +V  + E P+LLD+FL++ATEVDVDA+ DG  V 
Sbjct: 719  RPSYVLGGRAMEIVYDEEQLTSYFQNSVGEAPEHPILLDKFLENATEVDVDALSDGTDVY 778

Query: 774  IGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQFAVKD 833
            + GIMEHIE+AG+HSGDSACS+P Y+L   I D++  Q   LA EL V GLMNIQFAVKD
Sbjct: 779  VAGIMEHIEEAGIHSGDSACSIPPYSLPSSITDEISRQTVALAKELRVVGLMNIQFAVKD 838

Query: 834  NEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYYSVKEVV 893
              ++++EVNPRA+RT PFVSKAT  PL ++A +VM+G+TL++          Y SVKE V
Sbjct: 839  GVIFILEVNPRASRTAPFVSKATAVPLPRLATQVMLGKTLKELDPWSMRRSGYVSVKESV 898

Query: 894  LPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDK 953
             PFN+FPGVD LLGPEMRSTGEVMG+  TF EAY K +L  G   P+ G+  +SV + DK
Sbjct: 899  FPFNRFPGVDILLGPEMRSTGEVMGIAPTFEEAYLKGQLAGGQRLPQQGKVFISVNDRDK 958

Query: 954  QRVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNHEYTYIV 1013
              V D+A     LG+++ AT GTA +L E G+    VNKV+EGRP+I+D IKN +   +V
Sbjct: 959  TLVPDVARIFADLGFEIVATAGTAKLLKEHGVPTTHVNKVYEGRPNIVDMIKNGDIALVV 1018

Query: 1014 NTASGRQAIEDSKVLRRGALAHKVNYTTTLNAAFATCMSHTAD--AKASVTSVQELH 1068
            NTASG++ ++DSK +R+  L + V Y+TT++ A A   S  A      +V S+QE +
Sbjct: 1019 NTASGKRTVQDSKSIRQATLMYGVPYSTTVSGARAIAKSIAASRTCGVNVKSLQEYY 1075