Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1073 a.a., ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  734 bits (1896), Expect = 0.0
 Identities = 422/1058 (39%), Positives = 619/1058 (58%), Gaps = 25/1058 (2%)

Query: 6    DIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATY 65
            +I+ +L+LG+G + IGQA EFDYSG+QA KAL+EEG   +LVN N ATI T   +AD  Y
Sbjct: 4    EIKKVLVLGSGALKIGQAGEFDYSGSQALKALKEEGISSVLVNPNIATIQTSEGIADKVY 63

Query: 66   IEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATADAIDK 125
              P+    V +II+KERPD IL   GGQTALNC   L   G+L ++GV+++G + +AI  
Sbjct: 64   FLPVTTYFVEEIIKKERPDGILLAFGGQTALNCGAELYTQGILDKYGVKVLGTSVEAIMY 123

Query: 126  AEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGGIAYNR 185
             EDR  F K +  I ++ P +   +SME+A      +G+P ++R ++ +GG G GI  N 
Sbjct: 124  TEDRDLFVKKLDEINMKTPVSQAVESMEDAIAAARKIGYPVMVRSAYALGGLGSGICANE 183

Query: 186  EEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMGIHTG 245
            EEF ++       S   ++L++ESL GWKE E EV+RD ND+C  V ++ENFDP+GIHTG
Sbjct: 184  EEFLKLAESSFAFS--KQILVEESLKGWKEIEFEVIRDANDHCFTVASMENFDPLGIHTG 241

Query: 246  DSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPRVS 305
            +SI VAP  +L DKE ++++  S   +R +G+  G  N+Q+  N       +IE+N R+S
Sbjct: 242  ESIVVAPTCSLDDKELKLLQELSAKCIRHLGI-VGECNIQYAFNSDTDDYRVIEVNARLS 300

Query: 306  RSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPRFNFE 365
            RSSALASKATG+P+A VAAK+A+G++LD++     G    A   P +DY + KIPR++  
Sbjct: 301  RSSALASKATGYPLAFVAAKIALGYSLDQIGE--MGTPNSAYLAPQLDYYICKIPRWDLT 358

Query: 366  KFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDLDAPDALTKIR 425
            KFAG +  + + MKSVGE+M+IGR+ +E +QK LR +  G  G     D+   D    + 
Sbjct: 359  KFAGVSREIGSSMKSVGEIMSIGRSFEEIIQKGLRMIGQGMHGFVGNDDVHFDD----LD 414

Query: 426  YELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKA-GGFAGL 484
             EL      RI+ IA A   G S+D +  LT ID WFL +++ +V  +A++        +
Sbjct: 415  KELSRPTDLRIFSIAQAMEEGYSIDRIHELTKIDPWFLGKLKNIVDYKAKLSTYNKVEDI 474

Query: 485  NQDVLRKMKRKGFSDARLSKLL----GVSENE---IRRLRDQYNIHPVYKRVDTCAAEFK 537
              DV+R+ K  GFSD ++++ +    G  E E   +R  R    I P  KR++T A+E  
Sbjct: 475  PADVMREAKILGFSDFQIARFVLNPTGNMEKENLAVRAHRKALGILPAVKRINTVASEHP 534

Query: 538  SDTAYMYSTYDEE-CEANPTDKDK-IMVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 595
              T Y+Y TY  E  + N    +K ++VLG G  RIG  +EFD+C V+A    R+ GY++
Sbjct: 535  ELTNYLYMTYAVEGYDVNYYKNEKSVVVLGSGAYRIGSSVEFDWCSVNAVQTARKLGYKS 594

Query: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLARALEA 655
            IM+N NPETVSTDYD  DRLYF+ ++ E VL ++ +E+P+GVIV  GGQ P  LA  L  
Sbjct: 595  IMINYNPETVSTDYDMCDRLYFDELSFERVLDVIDLEQPRGVIVSVGGQIPNNLAMKLYR 654

Query: 656  AGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVVRP 715
              VPV+GTSP +IDRAE+R +F   + +LG+ QP    +T++E+      ++G+P++VRP
Sbjct: 655  QSVPVLGTSPVSIDRAENRNKFSAMLDQLGIDQPAWMELTSLEEVKGFVEKVGYPVLVRP 714

Query: 716  SYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGERVVIG 775
            SYVL G AM + YD+++L  +   A  VS E PV++ +FL++  E++ DA+     VV  
Sbjct: 715  SYVLSGAAMNVCYDDEELENFLKMAAEVSKEYPVVVSQFLENTKEIEFDAVAQNGEVVEY 774

Query: 776  GIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQFAVKDNE 835
             I EH+E AGVHSGD+    PA  +      ++++   ++A EL + G  NIQF  ++NE
Sbjct: 775  AISEHVEFAGVHSGDATLVFPAQKIYFATARRIKKISRQIAKELNISGPFNIQFLARNNE 834

Query: 836  VYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYYSVKEVVLP 895
            V +IE N RA+R+ PFVSK       + A R+M+     Q   T   I  +  VK     
Sbjct: 835  VKVIECNLRASRSFPFVSKVLKRNFIETATRIMLDAPYSQPDKTAFDI-DWIGVKASQFS 893

Query: 896  FNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDKQR 955
            F++    DP+LG +M STGEV  +G  F+EA   A +  G   PE      S     K  
Sbjct: 894  FSRLHKADPVLGVDMSSTGEVGCIGDDFSEALLNAMIATGFKIPEKAVMFSSGAMKSKVD 953

Query: 956  VVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHE---GRPHILDRIKNHEYTYI 1012
            ++D +  L   GYQ+ AT GTA  L   G+    V    E      +++  I +H++  I
Sbjct: 954  LLDASRMLFAKGYQIYATAGTAAFLNAHGVETTPVYWPDEKPGAENNVMKMIADHKFDLI 1013

Query: 1013 VNTAS--GRQAIEDSKVLRRGALAHKVNYTTTLNAAFA 1048
            VN      ++ + +   +RRGA+ H +   T    A A
Sbjct: 1014 VNIPKNHSKRELTNGYRIRRGAIDHNIPLITNARLASA 1051