Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1075 a.a., carbamyl phosphate synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  776 bits (2004), Expect = 0.0
 Identities = 439/1064 (41%), Positives = 641/1064 (60%), Gaps = 31/1064 (2%)

Query: 4    RTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADA 63
            + +I+ +L+LG+G + IG+A EFDYSG+QA KAL+EEG   IL+N N AT+ T   +AD 
Sbjct: 2    KENIKKVLLLGSGALKIGEAGEFDYSGSQALKALKEEGIETILINPNIATVQTSEGVADQ 61

Query: 64   TYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATADAI 123
             Y  P+    V K+I+KE+P+ I+   GGQTALNC +AL K G+L ++ V+++G    AI
Sbjct: 62   IYFLPVTPYFVEKVIQKEKPEGIMLAFGGQTALNCGVALYKEGILEKYNVKVLGTPVQAI 121

Query: 124  DKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGGIAY 183
               EDR  F + +  I ++  +++  ++ E+A +    +G+P I+R ++ +GG G G   
Sbjct: 122  MDTEDRELFVQKLNEINVKTIKSEAVENAEDARRAAKELGYPVIVRAAYALGGLGSGFCD 181

Query: 184  NREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMGIH 243
            N E+ + +  +    SP  ++L+++SL GWKE E EVVRD+ DNCI VC +ENFDP+GIH
Sbjct: 182  NEEQLDVLVEKAFSFSP--QVLVEKSLRGWKEVEYEVVRDRFDNCITVCNMENFDPLGIH 239

Query: 244  TGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPR 303
            TG+SI +AP+QTLT+ EY  +R  ++ ++R IG+  G  NVQ+  +P+     +IE+N R
Sbjct: 240  TGESIVIAPSQTLTNSEYHKLRELAIRIIRHIGI-VGECNVQYAFDPESEDYRVIEVNAR 298

Query: 304  VSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPRFN 363
            +SRSSALASKATG+P+A VAAKL +G+ L +L N +T   T A FEP +DYVV KIPR++
Sbjct: 299  LSRSSALASKATGYPLAFVAAKLGLGYGLFDLKNSVTK-TTSAFFEPALDYVVCKIPRWD 357

Query: 364  FEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDLDAPDALTK 423
              KF G +  L + MKSVGEVMAIGR  +E++QK LR +  G  G  E  +L  PD    
Sbjct: 358  LGKFHGVDKELGSSMKSVGEVMAIGRTFEEAIQKGLRMIGQGMHGFVENKELVIPD---- 413

Query: 424  IRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKAGG--- 480
            I   L+E   +RI+ I+ AFRAG ++D V  LT ID+WFL ++  ++K   E+   G   
Sbjct: 414  IDKALREPTDKRIFVISKAFRAGYTIDQVHELTKIDKWFLQKLMNIMKTSEEMHEWGNNH 473

Query: 481  --FAGLNQDVLRKMKRKGFSDARLSKLLGVS---ENE---IRRLRDQYNIHPVYKRVDTC 532
               A L  ++LRK K +GFSD ++++ +G     EN    +R+ R    I PV K++DT 
Sbjct: 474  KQIADLPVELLRKAKVQGFSDFQIARAIGYEGDMENGSLYVRKYRKAAGILPVVKQIDTL 533

Query: 533  AAEFKSDTAYMYSTYDEECEANPT----DKDKIMVLGGGPNRIGQGIEFDYCCVHAALAL 588
            AAE+ + T Y+Y TY     AN      D   I+VLG G  RIG  +EFD+C V A   +
Sbjct: 534  AAEYPAQTNYLYLTYSGV--ANDVHYLGDHKSIVVLGSGAYRIGSSVEFDWCGVQALNTI 591

Query: 589  REDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLK 648
            R++G+ ++M+N NPETVSTDYD  DRLYF+ +T E V+ I+ +E P GVIV  GGQ P  
Sbjct: 592  RKEGWRSVMINYNPETVSTDYDMCDRLYFDELTFERVMDILELENPHGVIVSTGGQIPNN 651

Query: 649  LARALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIG 708
            LA  L+A  + ++GTS  +ID AEDRE+F   + R+G+ QP    +T++E   E   E+G
Sbjct: 652  LALRLDAQNIHILGTSAQSIDNAEDREKFSAMLDRIGVDQPRWRELTSLEDINEFVDEVG 711

Query: 709  FPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICD 768
            FP++VRPSYVL G AM +  ++++L R+   A +VS + PV++ +F++ A EV++DA+  
Sbjct: 712  FPVLVRPSYVLSGAAMNVCSNQEELERFLKLAANVSKKHPVVVSQFIEHAKEVEMDAVAQ 771

Query: 769  GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQ 828
               ++   I EHIE AGVHSGD+    P   L  E   +++    ++A  L + G  NIQ
Sbjct: 772  NGEIIAYAISEHIEFAGVHSGDATIQFPPQKLYVETVRRIKRISREIAKALNISGPFNIQ 831

Query: 829  FAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIP-PYY 887
            +  KDN++ +IE N RA+R+ PFVSK       ++A +VM+G  +E+    K +    Y 
Sbjct: 832  YLAKDNDIKVIECNLRASRSFPFVSKVLKINFIELATKVMLGLPVEKP--EKNLFELDYV 889

Query: 888  SVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLS 947
             +K     FN+    DP+LG +M STGEV  +G+  + A  KA L  G   P+    L +
Sbjct: 890  GIKASQFSFNRLQKADPVLGVDMASTGEVGCIGSDTSCAVLKAMLSVGYRIPKKNILLST 949

Query: 948  VREGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVN-KVHEGRPHILDRIKN 1006
                 K  ++D A  LV  GY+L AT GT     E GI   LV     EG P  L+ + N
Sbjct: 950  GTMKQKADMMDAARMLVNKGYKLFATGGTHKTFAENGIESTLVYWPSEEGHPQALEMLHN 1009

Query: 1007 HEYTYIVNTASGRQA--IEDSKVLRRGALAHKVNYTTTLNAAFA 1048
             E   +VN      A  +++   +RR A+   V   T    A A
Sbjct: 1010 KEIDMVVNIPKNLTAGELDNGYKIRRAAIDLNVPLITNARLASA 1053