Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., 3-methylcrotonoyl-CoA carboxylase, alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 69.7 bits (169), Expect = 7e-16
 Identities = 64/237 (27%), Positives = 99/237 (41%), Gaps = 20/237 (8%)

Query: 650 ARALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRL------GLKQPDNATVTAIEQAIEK 703
           AR  EAAG+  +G   DAID    +   +  +         G    D    T   +A++ 
Sbjct: 92  ARKCEAAGIVFVGPGSDAIDAMGSKSAAKAIMTAAQVPLVPGYHGDDQTDATLKAEALK- 150

Query: 704 SREIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFN----EAVSVSNESPVLLDRFLDDAT 759
              IGFP++++ +Y  GG+ M IV  E ++    N    EA S      +L++R+L    
Sbjct: 151 ---IGFPMLIKAAYGGGGKGMRIVEHEGEIMDAINSARREAASSFGNDKLLMERYLRQPR 207

Query: 760 EVDVDAICD--GERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAF 817
            V+V    D  G  + +      I++      + A   PA  LS E++ +M E     A 
Sbjct: 208 HVEVQVFADTFGNAIYLSDRDCSIQRRHQKVVEEA---PAPGLSDELRTQMGEAAVAAAK 264

Query: 818 ELGVRGLMNIQFAV-KDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTL 873
            +   G   ++F +  DN  Y +E+N R     P     TG  L K    V  GQ L
Sbjct: 265 AIDYVGAGTVEFLLDTDNSFYFMEMNTRLQVEHPVTEMVTGQDLVKWQLMVASGQPL 321



 Score = 42.7 bits (99), Expect = 9e-08
 Identities = 72/330 (21%), Positives = 123/330 (37%), Gaps = 52/330 (15%)

Query: 30  GAQACKALREE---GYRVILVNSNPATIMTDPEMADATYI--------EPIHWEVVRKII 78
           G  AC+ ++     G R + + S+         MAD ++           +  +++ +I 
Sbjct: 11  GEIACRIIKTAQAMGVRTVALYSDADKNARHVAMADESFYLGGSAPADSYLKGDLIIEIA 70

Query: 79  EKERPDAILPTMG-----GQTALNCALALEKHGVLAEFGVEMIGATADAIDKAEDRSRFD 133
           +K +  AI P  G        A  C  A          G+  +G  +DAID    +S   
Sbjct: 71  KKAQAQAIHPGYGFLSENADFARKCEAA----------GIVFVGPGSDAIDAMGSKSAAK 120

Query: 134 KAMKSI------GLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGGIAYNREE 187
             M +       G        A    EA K+    GFP +I+ ++  GG G  I  +  E
Sbjct: 121 AIMTAAQVPLVPGYHGDDQTDATLKAEALKI----GFPMLIKAAYGGGGKGMRIVEHEGE 176

Query: 188 FEEICT----RGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIV----CAIENFDP 239
             +               ++LL++  L   +  E++V  D   N I +    C+I+    
Sbjct: 177 IMDAINSARREAASSFGNDKLLMERYLRQPRHVEVQVFADTFGNAIYLSDRDCSIQR--- 233

Query: 240 MGIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIE 299
                   +  APA  L+D+    M  A++A  + I    G   V+F ++  D     +E
Sbjct: 234 ---RHQKVVEEAPAPGLSDELRTQMGEAAVAAAKAIDY-VGAGTVEFLLD-TDNSFYFME 288

Query: 300 MNPRVSRSSALASKATGFPIAKVAAKLAVG 329
           MN R+     +    TG  + K    +A G
Sbjct: 289 MNTRLQVEHPVTEMVTGQDLVKWQLMVASG 318