Pairwise Alignments

Query, 205 a.a., HNH endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., conserved domain protein from Pseudomonas syringae pv. syringae B728a

 Score = 45.1 bits (105), Expect = 1e-09
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 12/137 (8%)

Query: 38  KKIVRDRLHTLQGELCVYCEKKYSVDEMQVEHIKPKSGRNAQPNLCFTYSNYAVSCIQEN 97
           K+ + DRL   Q   C YC ++  +D   +EH +P   ++    L   +SN   SC++E 
Sbjct: 36  KRDLHDRLLQEQNFSCCYCGREIELDSSHIEHFRP---QDHYLPLALEFSNLHASCLRET 92

Query: 98  RKTQT--CGQKKK---DNILFIEPTSPSCNSHFSLDTDGFINPRGFKNRKEKHSIQTTID 152
                  CG  K    D  L I PT   C   F     G I      +        T I+
Sbjct: 93  TPGSPLHCGHYKGNWFDEDLHISPTEDDCEQRFRYLLTGKIQSTSHTDL----PATTMIE 148

Query: 153 MLGLNKPHLQLERKKQI 169
            L L+  +L   R++ I
Sbjct: 149 KLALDIAYLTKRRQEAI 165