Pairwise Alignments

Query, 261 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., Membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  192 bits (488), Expect = 6e-54
 Identities = 105/250 (42%), Positives = 152/250 (60%), Gaps = 2/250 (0%)

Query: 1   MELSLEVLGLLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFS 60
           + + L  L +L +VA +AGFIDA+AGGGGLLT PALL AG+PP   L TNKL S+FGS +
Sbjct: 5   LSVDLSTLAILAVVAFIAGFIDAIAGGGGLLTTPALLTAGLPPHLVLGTNKLSSTFGSAT 64

Query: 61  ATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLA 120
           A+  F ++ +   +    A+  T VGA  GA    Y+ A  L  ++P+++    LY L  
Sbjct: 65  ASFTFYKRKLFHPRQWTHALVGTLVGALTGAIVAHYLPAEWLNKMLPVIVFACGLYLLFG 124

Query: 121 PTTKTH-TGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVEATART 179
            T K      AP+ +T +    GF +GFYDG  GPGTG+ +TV  + L    LV+A+   
Sbjct: 125 GTPKAPLDSDAPIKKT-WQSPQGFSLGFYDGVAGPGTGAFWTVSSLLLYPIDLVKASGVA 183

Query: 180 KVLNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLVITMS 239
           + +NF SNIAAL+ F+ +G   W IGL+M +   IGA  GA+  IS G ++IRP+ IT+ 
Sbjct: 184 RSMNFVSNIAALSVFIFSGQVDWVIGLSMGLSVMIGAFFGARTAISGGAKFIRPVFITVV 243

Query: 240 MLMALKLLWE 249
           + + ++L W+
Sbjct: 244 LGLTVRLAWQ 253