Pairwise Alignments

Query, 261 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score = 60.5 bits (145), Expect = 3e-14
 Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 29/261 (11%)

Query: 10  LLFLVAGVAGFIDAMAG-GGGLLTLPALL--------AAGVPPTQALATNKLQSSFGSFS 60
           L  L+ G AG +  + G GGGL+ +P L+        +A +    A+ T+     F S +
Sbjct: 5   LYLLLGGFAGVLAGLFGVGGGLIIVPVLVFSFSAQGFSADILTHLAVGTSLATIVFTSIN 64

Query: 61  ATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSLIPL--LLLGISLYFL 118
           + L   RKG V    +        VGAALG+     I   +L  +I +  L + + + F 
Sbjct: 65  SILTHHRKGAVRWPTVLWMTFGILVGAALGSLTAAAIQGPMLQKIIGVFALAMAVQMGFD 124

Query: 119 LAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVEATAR 178
           L P     TG AP         VG  IG+    FG G GS+ +V ++      + +A A 
Sbjct: 125 LRPKA---TGRAP--GRPELSLVGVVIGWASAIFGIGGGSL-SVPYLTWRSVPMQQAVAT 178

Query: 179 TKVLNFTSNIAALTFFLIAG-----LPIWEIG-------LTMAVGGFIGARMGAKVVISK 226
           +        IA    F++ G     LP W +G       L +A      AR+GAK+    
Sbjct: 179 SAACGLPIAIAGALSFMVVGWHETQLPDWSLGFVYLPAMLGIAATSMFFARLGAKLAHRL 238

Query: 227 GQRWIRPLVITMSMLMALKLL 247
             + ++ L   + + + +  L
Sbjct: 239 SAKVLKRLFALLLLSVGINFL 259