Pairwise Alignments

Query, 261 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., membrane protein from Azospirillum brasilense Sp245

 Score = 85.9 bits (211), Expect = 7e-22
 Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 7/242 (2%)

Query: 10  LLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFSATLYFVRKG 69
           LL   A +AG ++A+AGGG  LTLPAL+ AGVPP  A AT  +    G +++ +Y  R  
Sbjct: 7   LLLAAAFLAGAMNAVAGGGSFLTLPALIYAGVPPVAANATGTVALLPG-YASGVYGYRHD 65

Query: 70  VVSLKAMRLAI--ACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLAPTTKTHT 127
           +  +  + L      +  G  +GA  +     ++  S++P LLL  +  F          
Sbjct: 66  LEPVGGVGLVTLSVVSLTGGLIGAALLLVTPDSVFRSIVPWLLLVATALFAFGGMLAARL 125

Query: 128 GPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVEATARTKVLNFTSN 187
               L  T       F +  Y G+F  G G +        G  +L    A   + +    
Sbjct: 126 RAVGLHGTGAMLATLFAVSVYGGYFNGGLGILLLAQLSLFGMTNLNAMNALKNLFSAVLT 185

Query: 188 IAALTFFLIAGLPIWEIGLTMAV----GGFIGARMGAKVVISKGQRWIRPLVITMSMLMA 243
             A+  + I G   W     M V    GG++GAR+G K+     +  I  + + MS+L  
Sbjct: 186 AIAVAAYAIGGAVEWSYAALMTVAAVAGGYVGARVGRKIPSRILRAGIIAVGLAMSVLFF 245

Query: 244 LK 245
           LK
Sbjct: 246 LK 247