Pairwise Alignments

Query, 261 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  272 bits (696), Expect = 4e-78
 Identities = 137/250 (54%), Positives = 178/250 (71%)

Query: 2   ELSLEVLGLLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFSA 61
           EL+L+V  LLF VA VAGFID++AGGGGLLT+PAL+ AG+PP  AL TNKLQ+  GSF A
Sbjct: 4   ELTLQVAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFA 63

Query: 62  TLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLAP 121
           +LYFVRKG+V LK ++LA+ C F+GAALG   VQ +D  +L  ++P L+L I  YFL + 
Sbjct: 64  SLYFVRKGLVDLKTVKLALFCAFIGAALGTVLVQLVDTKILELVLPFLILAIGCYFLFSK 123

Query: 122 TTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVEATARTKV 181
                     L+ T FAFT   G+G YDGFFGPGTGS F + FV L  F L +ATA  KV
Sbjct: 124 KVSEEDRHQVLTPTVFAFTAALGVGLYDGFFGPGTGSFFALAFVTLAGFGLAKATAHAKV 183

Query: 182 LNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLVITMSML 241
           LNF++NIA+L FF + G  IW +GL M  G  IGA +G+++V++KG + I+PLV+TMS+ 
Sbjct: 184 LNFSTNIASLIFFALGGKVIWLLGLVMLAGQAIGATLGSRLVVTKGTKIIKPLVVTMSLA 243

Query: 242 MALKLLWEQH 251
           M+LKLL  Q+
Sbjct: 244 MSLKLLASQY 253