Pairwise Alignments

Query, 261 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  173 bits (438), Expect = 4e-48
 Identities = 101/253 (39%), Positives = 142/253 (56%), Gaps = 5/253 (1%)

Query: 1   MELSLEVLG--LLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGS 58
           MEL LE     LL ++  +AGFIDA+ GGGGLL++PALL  G+PP  AL TNK  +SFGS
Sbjct: 1   MELLLEPSNWALLAVIGLIAGFIDAVVGGGGLLSIPALLTLGIPPHTALGTNKFAASFGS 60

Query: 59  FSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFL 118
             A   + R+ ++      +A   TF+GA LG+  V  ++A  L   +PLL++GI++Y L
Sbjct: 61  SMAAWTYYRQHLLKPSFWYMAFIATFIGAVLGSVFVYLLNAQWLEKALPLLIIGIAIYSL 120

Query: 119 LAPTTKTHT---GPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVEA 175
           L+P   + T    P            G  +G YDGF GPG G+ +TV   AL    L+ +
Sbjct: 121 LSPNAISDTDCQAPTKAQSKLKQSLQGLLLGAYDGFAGPGIGAFWTVSSGALYKLPLLHS 180

Query: 176 TARTKVLNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLV 235
            A  K + FTSN+ AL  F   G   W+IGL M +   +G+ +GA+  I  G  +IRPL 
Sbjct: 181 CALAKAMTFTSNLTALAIFGFLGQVHWQIGLWMGLSMMLGSFIGARCAIKFGMPFIRPLF 240

Query: 236 ITMSMLMALKLLW 248
           I + + +A  L W
Sbjct: 241 ILIVLSIAANLAW 253



 Score = 23.1 bits (48), Expect = 0.006
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 209 AVGGFIGARMGAKVVISKGQRWIRPLVITMSMLMALKLLWEQHHAALLSMLG 260
           A  GF G  +GA   +S G  +  PL+ + ++  A+         A+   LG
Sbjct: 152 AYDGFAGPGIGAFWTVSSGALYKLPLLHSCALAKAMTFTSNLTALAIFGFLG 203