Pairwise Alignments

Query, 286 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transcriptional regulator, LysR family from Synechococcus elongatus PCC 7942

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 73/291 (25%), Positives = 120/291 (41%), Gaps = 28/291 (9%)

Query: 3   LEGIETLLVLSKEKTMSRTGSQLYISQSAVSKRIANLEKKLGKKLIVPAGRHIKLTADAE 62
           L+ +  L  ++ E +  R    LY+SQ AVS ++ NLE++L   L    GR  +LT +A 
Sbjct: 8   LDQLRILRAIAAEGSFKRAADSLYVSQPAVSLQVQNLERQLNVPLFDRGGRRAQLT-EAG 66

Query: 63  QLIASIGPTFNELHG----LIFEQQTLEDNTLLRMDCSETLVAGYLGQTMGQHRKQDPHW 118
            L+ S G     L       I + Q L+  TL+ +  S+T     L + +G+ R++ P  
Sbjct: 67  HLLLSYGERILSLCAETCRAIEDLQNLQGGTLI-IGASQTTGTYLLPRMIGRFRQRYPDV 125

Query: 119 VIT--TNHTPRIVENVQSGKATLGFCAGYLPA--NHGLLTFHLGDEPFTVISQA--PLHA 172
            +    + T R   +V +G+  L    G +P      L+T    ++   +I     PL  
Sbjct: 126 AVQLHVHSTRRTSWSVANGQIDLAIIGGEVPTELQDSLVTIPYAEDELALILPVSHPLTQ 185

Query: 173 LPS---------ELITNDLANPANTYQAAMLHKQGI-----RPAMEMDSYTAAAQLALGG 218
             S         + I  D  +        +L + GI     R  ME++S  A       G
Sbjct: 186 QASIQREDLYKLQFIALDSQSTIRKVIDQVLSRSGIETRRLRIEMELNSIEAIKNAVQAG 245

Query: 219 MLPALVPRS-IVSTLKIEPQHCFDFAELADLTRPIHICLRASRYRSSRVQA 268
           +  A V  S I   L++   H     +L  + R + +    +RYRS    A
Sbjct: 246 LGAAFVSVSAIEKELEMGSLHRAQTNDLC-VQRTLSVIYNPNRYRSKAAVA 295