Pairwise Alignments

Query, 286 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., HTH-type transcriptional activator IlvY from Rahnella sp. WP5

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 1   MLLEGIETLLVLSKEKTMSRTGSQLYISQSAVSKRIANLEKKLGKKLIVPAGRHIKLTAD 60
           M L  ++  L L++ +   R+   +++S S +S++I  LE++LG+ L     R ++LT+ 
Sbjct: 1   MDLRDLKLFLHLAESRHFGRSSKAMHVSPSTLSRQIQRLEEELGQPLFQRDNRTVQLTSA 60

Query: 61  AEQLIASIGPT---FNELH-GLIFEQQTLEDNTLLRMDCSETLVAGYLGQTMGQHRKQDP 116
            EQL      T   + +L  GL     TL     L + CS T    +L   + + R Q P
Sbjct: 61  GEQLKNFAQQTLLHYQQLRSGLDQHGPTLSGE--LHLFCSVTAAYSHLPPILDRFRAQHP 118

Query: 117 --HWVITTNHTPRIVENVQSGKATLGFCAGYLPANHGLLTF-HLGDEPFTVIS 166
                +TT      VE VQS +A L   AG   +  G + F  +G+ P  +IS
Sbjct: 119 LVEIKLTTGDAADAVEKVQSTEADLAI-AGRPESLPGSVDFTQIGEIPMILIS 170