Pairwise Alignments

Query, 206 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., putative transporter, required for glycine utilization (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  131 bits (330), Expect = 7e-36
 Identities = 75/198 (37%), Positives = 110/198 (55%), Gaps = 1/198 (0%)

Query: 5   LLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVFWIKD 64
           +L ++ +      A++G L AGR  MD FGV+++A VTA+GGG++RD+ LG  P+ W+K 
Sbjct: 1   MLLMLYLIAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKH 60

Query: 65  TNYLWVIMITCALTMLLVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSALIAII 124
             YL +      LT+ L R  + L    L V DA GL  F  IG   AL      L+A +
Sbjct: 61  PEYLVLTTAAAMLTVFLARWMRHLRSLFL-VLDAAGLVAFTLIGCMTALEMGHGMLVASV 119

Query: 125 MGVITGCGGGIIRDVLAREIPMVLRSEVYATACIIGGIFHTTALAMGYSSSTALLSGVFS 184
            GVITG  GGI+RD+   +IP++ R E+YA+        +   + +   S  A+L  +F 
Sbjct: 120 SGVITGVFGGILRDIFCNDIPLIFRRELYASVSFAAAWCYLLCVFLQLPSEQAILITLFG 179

Query: 185 TLLIRLGAIRWHLSLPTF 202
             L+RL AIR+H  +P F
Sbjct: 180 GFLLRLLAIRFHWEMPKF 197



 Score = 26.6 bits (57), Expect = 3e-04
 Identities = 14/61 (22%), Positives = 27/61 (44%)

Query: 4   SLLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVFWIK 63
           SL  ++D  G   F + G + A  +        V   +T + GG +RD+     P+ + +
Sbjct: 86  SLFLVLDAAGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILRDIFCNDIPLIFRR 145

Query: 64  D 64
           +
Sbjct: 146 E 146