Pairwise Alignments

Query, 206 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., putative transporter, required for glycine utilization (from data) from Shewanella oneidensis MR-1

 Score =  247 bits (630), Expect = 1e-70
 Identities = 123/199 (61%), Positives = 155/199 (77%)

Query: 6   LYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVFWIKDT 65
           +Y  D+ GTAVFA+SG L AGR +MDPFGV+VLASVTA+GGG+IRD  +GATPVFWI+D 
Sbjct: 5   IYFFDLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRDP 64

Query: 66  NYLWVIMITCALTMLLVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSALIAIIM 125
           NY+ VI+ T    +LLVRRP+++  ++LPV DA+GLA+F  IG EKAL    S +IA++M
Sbjct: 65  NYIIVILATVVACLLLVRRPRKMPEYVLPVADALGLALFTVIGAEKALNMGLSGMIAVVM 124

Query: 126 GVITGCGGGIIRDVLAREIPMVLRSEVYATACIIGGIFHTTALAMGYSSSTALLSGVFST 185
           G+ITG GGGIIRD+L R+IPMVLR+E+YATA IIGGI +T +LA G    TAL   + S 
Sbjct: 125 GLITGVGGGIIRDLLCRQIPMVLRTEIYATASIIGGIGYTVSLACGMGEKTALFLAMASA 184

Query: 186 LLIRLGAIRWHLSLPTFAL 204
           L+IRL AI+WHLSLP F L
Sbjct: 185 LIIRLCAIKWHLSLPAFDL 203



 Score = 33.5 bits (75), Expect = 3e-06
 Identities = 18/59 (30%), Positives = 29/59 (49%)

Query: 1   MDTSLLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPV 59
           M   +L + D  G A+F V G   A  + +     +V+  +T +GGG IRD+     P+
Sbjct: 87  MPEYVLPVADALGLALFTVIGAEKALNMGLSGMIAVVMGLITGVGGGIIRDLLCRQIPM 145