Pairwise Alignments

Query, 206 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  135 bits (340), Expect = 5e-37
 Identities = 78/203 (38%), Positives = 115/203 (56%), Gaps = 14/203 (6%)

Query: 4   SLLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVFWIK 63
           + + ++D  GT  FA+SG+ LA   + D FG  V+   TAIGGGTIRD+ L  TP  W+ 
Sbjct: 3   TFVQILDFIGTFAFAISGIRLASAKRFDWFGAYVVGLATAIGGGTIRDVLLDVTPG-WM- 60

Query: 64  DTNYLWVIMITCALTMLLVRRPKRLAWWILP------VCDAIGLAVFVGIGVEKALIYQD 117
            TN +++I    AL  ++         W++       + D IGLA+F  +GV K++    
Sbjct: 61  -TNPIYLICTGLALIWVIC-----FGRWLIRLNNTFFIFDTIGLALFTVVGVGKSIALGY 114

Query: 118 SALIAIIMGVITGCGGGIIRDVLAREIPMVLRSEVYATACIIGGIFHTTALAMGYSSSTA 177
              +AIIMG ITG  GG+IRDV   EIP++ R E+YA AC++GGI +    A G  S   
Sbjct: 115 PFWVAIIMGSITGAAGGVIRDVFINEIPLIFRKEIYAMACVVGGIAYWLCDAAGMESYVC 174

Query: 178 LLSGVFSTLLIRLGAIRWHLSLP 200
            L G  +  + R+ A+++H+ LP
Sbjct: 175 QLVGGSAVFVTRILAVKYHICLP 197