Pairwise Alignments

Query, 276 a.a., cobalamin-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  205 bits (522), Expect = 7e-58
 Identities = 101/252 (40%), Positives = 155/252 (61%), Gaps = 2/252 (0%)

Query: 24  PAERIISLAPHATEIAYAAGLGDKLVAVSEYSDYPPQALELERVANHQTINIEKILTLKP 83
           PA+RII+L+PHA E+ YA G G+ +VA ++Y+DYP  A ++  +  +  I IE++L L P
Sbjct: 4   PAKRIIALSPHAVEMLYAIGAGEAIVAATDYADYPEAAKKIPSIGGYYGIQIERVLELNP 63

Query: 84  DLIIAWPAGNPPRELAKLRQLGFTIYDSQTKTLDEIADNIEALSHYSANPEVGQKAAHDF 143
           DL++ W  GN   ++ +L+ LGF +Y S  +TL+++A  IE L   + + E+  + A D+
Sbjct: 64  DLVVVWDTGNKAEDINQLKSLGFKLYSSSPQTLEDVAKEIEELGQLTGHVELANQVATDY 123

Query: 144 RQRLQDLRTQYASNQPIRYFYQLSEKPIITLAQGHWPSEVFSLCGGVNIFADSEVPYPQV 203
           R+ L  LR + A+    + FYQL   P++T+A+  W  ++  +C G N+F D+   YPQV
Sbjct: 124 RRELLRLRNENAAKSEPKVFYQLWSTPLMTVAKNSWIQQIIGVCHGKNVFYDAASDYPQV 183

Query: 204 SIEQVLVKQPQVIFTS-EHAIANGHMWRAWQAELSAVQNDQVWALNADWLNRPTPRTLDA 262
           S+E VL+  P+VI  S E     G  WR W  E+ AV+N  ++ LNAD L+R TPR L  
Sbjct: 184 SLENVLLTLPEVILQSEEEGNVKGIDWRKW-TEIPAVKNQHIYQLNADLLHRATPRALLG 242

Query: 263 VEQVCTYLKIAQ 274
           V+ VC  L  A+
Sbjct: 243 VKAVCDALDKAR 254