Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., dihydropyrimidine dehydrogenase from Pseudomonas fluorescens FW300-N2E3

 Score =  194 bits (492), Expect = 7e-54
 Identities = 141/443 (31%), Positives = 212/443 (47%), Gaps = 26/443 (5%)

Query: 28  FVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHNYIPQWLKLANEGRILEAADLAHQT 87
           F ++  P   +QA  +A RCL C +  C   CP    IP +++  ++  +  AA      
Sbjct: 22  FTDLAPPLNDRQAHLEASRCLYCYDAPCVNACPSDIDIPSFIRNIHQENVQGAAQTILSA 81

Query: 88  NSLPEVCGRVCPQDRLCEGSCTLN--ADFGAVTIGNIEKYITDTAFEMGWKPDMSNVVWT 145
           N L   C RVCP + LC+ +C  N   +   V IG +++Y  D A     +        T
Sbjct: 82  NILGGSCARVCPTEILCQHACVRNNAEECAPVLIGLLQRYAIDNAHFS--EHPFQRAAAT 139

Query: 146 DKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGGLLTFGIPSFKLEKGVMENRRRI 205
            K++A++GAGPAGL+ A     +G   V+F+   + GGL  +GI  +KL     +     
Sbjct: 140 GKRIAVVGAGPAGLSCAHRSAMHGHEVVIFEAREKAGGLNEYGIAKYKLVDDFAQRELDF 199

Query: 206 FSEM-GIEFRLNVEVGQDITLQQLLDEYDAVFLGVGTYQYMRAGLANEDAPGVYDALPFL 264
             E+ GIE R   ++G++++L +L  ++DAVFLG+G     + GLA+EDAPG       L
Sbjct: 200 LLEIGGIEIRHGQKLGENLSLSELHQQFDAVFLGLGLAASKQLGLADEDAPG-------L 252

Query: 265 ISNTYKVMELNNEAPFIDM-AGKNVVVLGGGDTAMDCVRTSIRQGASRVICAYRRDEENM 323
           ++ T  + EL        M    + +VLG G+TA+D      R GA  V   YRR  E+M
Sbjct: 253 LAATDYIRELRQADDLSQMPLADHCIVLGAGNTAIDMAVQMARLGARDVNLVYRRGLEDM 312

Query: 324 PGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVTGVKVVKTALGEPDAAGRRKPEPVAG 383
             +  E   AK   V  M   QP  + +N +GQV G++  +T +               G
Sbjct: 313 GATAHEQDIAKANQVRLMTWAQPQDVLLNDKGQVRGMRFARTRMENGRLIS-------TG 365

Query: 384 SEHVLPADAVIMAFGFQPHKMAWLEPFDVELDQWG-RIKAPAKQTYQYQTTNPKIFAGGD 442
               L ADA+  A G +    A  +P   EL + G RI+       Q +T+ P ++AGGD
Sbjct: 366 DTFELAADAIFKAIGQKFDDCALSDPLARELKRQGERIQVDE----QMRTSIPGVYAGGD 421

Query: 443 AVR-GSDLVVTAIDEGRKAAEGI 464
                 DL V A+  G+ AAE I
Sbjct: 422 CTSLDQDLTVQAVQHGKLAAEAI 444