Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., Glutamate synthase, NADH/NADPH, small subunit 2 (NCBI) from Rhodospirillum rubrum S1H

 Score =  388 bits (997), Expect = e-112
 Identities = 217/476 (45%), Positives = 290/476 (60%), Gaps = 16/476 (3%)

Query: 1   MSQNVYQFIDVNRVDPAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCP 60
           M++ + QF  +++  P K+    R+++F EIY  FT   A  QA RC  CG P+C+  CP
Sbjct: 1   MARKMLQFTRLDQRTPDKRSAGTRRVDFDEIYGRFTPDAAGDQASRCEQCGIPFCQIHCP 60

Query: 61  VHNYIPQWLKLANEGRILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLNAD-FGAVTI 119
           + N IP WL L   GR+ EA  L+  TNS+PE+CGR+CPQDRLCEGSC L     GAVTI
Sbjct: 61  LQNNIPDWLMLTAAGRLEEAYALSSATNSMPEICGRICPQDRLCEGSCVLEQSRHGAVTI 120

Query: 120 GNIEKYITDTAFEMGWKPDMSNVVWTDKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYP 179
           G +EK+ITDTA+E GW   +  +   ++ V IIG GPAG+AAA+ L   G +  ++DRY 
Sbjct: 121 GAVEKFITDTAWERGWVKPILPLREREQSVGIIGGGPAGMAAAEQLRAQGYQVTLYDRYD 180

Query: 180 EIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEYDAVFLGV 239
            IGGLL +GIP FKLEK V+E R  + +  G+ F+ N EVG+D +L +L   +DAV +  
Sbjct: 181 RIGGLLVYGIPGFKLEKSVVERRVDLLARSGVIFKTNFEVGRDASLPELRKTHDAVLIAT 240

Query: 240 GTYQYMRAGLANEDAPGVYDALPFLISNTYKVMELNNEAP-----FIDMAGKNVVVLGGG 294
           G Y+     +      GV  AL +LI++      L +  P      +D   K VVV+GGG
Sbjct: 241 GVYKARGLSIPGAGLRGVTKALDYLIASNR--TGLGDRVPAFEDGTLDAKDKAVVVIGGG 298

Query: 295 DTAMDCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQ 354
           DTAMDC+RT+IRQGA  V C YRRD  NMPGS+REV NA EEGV+F++   P    V   
Sbjct: 299 DTAMDCLRTAIRQGARSVKCLYRRDRANMPGSQREVINAVEEGVDFVWLTAPEA--VLGD 356

Query: 355 GQVTGVKVVKTALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGFQPHKM--AWLEPFDV 412
            + TGV+  +  LG  DA GR+ P+P+AGSE  L AD VI A GF+P  +   + EP  +
Sbjct: 357 ERATGVRAHRMHLGVADATGRQSPQPIAGSEFTLEADLVIEALGFEPEDLPAVFGEP-RL 415

Query: 413 ELDQWGRIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILDYL 468
            + +WG I+          +    +FA GD VRG+ LVV A+ +GR AAEGI  YL
Sbjct: 416 PITRWGTIQI---DPVSKMSGLDGVFAAGDIVRGASLVVWAVRDGRDAAEGIRRYL 468