Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., glutamate synthase subunit beta (RefSeq) from Shewanella loihica PV-4

 Score =  649 bits (1675), Expect = 0.0
 Identities = 308/464 (66%), Positives = 370/464 (79%), Gaps = 2/464 (0%)

Query: 4   NVYQFIDVNRVDPAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHN 63
           N +QFI+V R DP K     R  +F+EIY+PF + Q   QADRCLDCGNPYCEWKCP+HN
Sbjct: 3   NDFQFIEVGRKDPTKHDAKHRATQFIEIYQPFAQPQVNEQADRCLDCGNPYCEWKCPLHN 62

Query: 64  YIPQWLKLANEGRILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLNADFGAVTIGNIE 123
           YIP WLKLA +GRILEAA+L H+TN+LPE+CGRVCPQDRLCEG+CTLN DFGAVTIGN+E
Sbjct: 63  YIPNWLKLAKQGRILEAAELVHETNTLPEICGRVCPQDRLCEGACTLNDDFGAVTIGNVE 122

Query: 124 KYITDTAFEMGWKPDMSNVVWTDKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGG 183
           KYITDTA   GW+PDMS VV   ++VAIIGAGPAGL  ADIL RNGV+ VVFD++P+IGG
Sbjct: 123 KYITDTAIAQGWRPDMSKVVKRQERVAIIGAGPAGLGCADILARNGVKAVVFDKHPQIGG 182

Query: 184 LLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEYDAVFLGVGTYQ 243
           LLT+GIP+FKL+K VME RR +   MGIEF+L + VGQDI    LL +YDAVFLG+GTY 
Sbjct: 183 LLTYGIPAFKLDKSVMEIRRTVMEGMGIEFKLGITVGQDIGFDTLLADYDAVFLGMGTYT 242

Query: 244 YMRAGLANEDAPGVYDALPFLISNTYKVM-ELNNEAPFIDMAGKNVVVLGGGDTAMDCVR 302
            M+AGL NEDA GVY ALP+LI NT+ VM   + E P++ +AG+ VVVLGGGDTAMDCVR
Sbjct: 243 PMKAGLENEDAKGVYQALPYLIGNTHNVMGTTDEETPYLSLAGQKVVVLGGGDTAMDCVR 302

Query: 303 TSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVTGVKV 362
           T++RQGAS V C YRRDEENMPGSRREV+NA+EEGV F+FN QP  I+  + G V+G++ 
Sbjct: 303 TAVRQGASEVTCVYRRDEENMPGSRREVQNAREEGVNFLFNRQPTAIK-TSDGAVSGIEC 361

Query: 363 VKTALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGFQPHKMAWLEPFDVELDQWGRIKA 422
           V+TALG PD +GRR+PEP+ GSE ++ ADA+I+AFGFQP    W   + +ELDQWGR+ A
Sbjct: 362 VETALGAPDDSGRRRPEPIEGSEQLIEADAIIIAFGFQPSPAKWFGDYGIELDQWGRVVA 421

Query: 423 PAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILD 466
           P      +QT+NPK+FAGGD VRGSDLVVTAI EGR AA GIL+
Sbjct: 422 PKVADNPFQTSNPKVFAGGDMVRGSDLVVTAIAEGRDAALGILN 465