Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1410 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Shewanella loihica PV-4

 Score =  201 bits (511), Expect = 1e-55
 Identities = 133/432 (30%), Positives = 210/432 (48%), Gaps = 33/432 (7%)

Query: 44  ADRCLDCGNPYCEWKCPVHNYIPQWLKLANEGRILEAADLAHQTNSLPEVCGRVCPQDRL 103
           +D   DC  P C+  CP    +  +L    +G   EA  +  QT  LP   GRVCP    
Sbjct: 100 SDHFADCEAP-CQQACPAGVDVQSYLLHIAQGNHKEAVKVIKQTLPLPLSIGRVCPA--F 156

Query: 104 CEGSCTLNADFGAVTIGNIEKYITDTAF--EMGWKPDMSNVVWTDKKVAIIGAGPAGLAA 161
           CE +C        + I  ++++  D     E  + P  +    T K+VAIIG+GPAG++A
Sbjct: 157 CESACRRGELDEPLAIRQLKRHAADLDLGSEDTYVPPKAPA--TGKRVAIIGSGPAGISA 214

Query: 162 ADILVRNGVRPVVFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQ 221
              L  +G    +F+  P+ GG L +GIP ++L K +++    +  + G+  + +  +G+
Sbjct: 215 GYYLSNSGHEVTIFESMPKAGGWLRYGIPEYRLPKQILDREIDLLCQNGLVIQTDTRLGR 274

Query: 222 DITLQQLLDEYDAVFLGVGTYQYMRAGLANEDAPGVYDALPFL----ISNTYKVMELNNE 277
           DI L++L++++DAV L +G  + +       D  G Y  + +L      N Y        
Sbjct: 275 DIHLKELVNQFDAVCLAIGAQKAVPMNYPGVDLEGCYLGVDYLKDHCTDNNYH------- 327

Query: 278 APFIDMAGKNVVVLGGGDTAMDCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEG 337
                  G+ V V+GGG+TA+DC RT++R+GA  V  AYRR  + MP    E++ A+ EG
Sbjct: 328 ------TGQKVAVIGGGNTAIDCARTALRKGA-EVTLAYRRTRDEMPAEVYEIEEAEHEG 380

Query: 338 VEFMFNLQPLGIEVNAQGQVTGVKVVKTALGEPDAAGRRKPEPVAGS-----EHVLPADA 392
           V F F   P+    +A G++  +   K  LGEPDA+GRR P+    +     + V+PA +
Sbjct: 381 VRFYFLTNPIENHGDANGRINAITFEKMRLGEPDASGRRSPQTTGETFTEAFDTVIPAVS 440

Query: 393 VIMAFGFQPHKMAWLEPFDVELDQWGRIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVT 452
                 F  H  + L   +V L +W          +   +   K+F  GD+  G    V 
Sbjct: 441 QTPDMTFLEHPESQLSTGEVALTRWNTFSG---CEHTMSSGVEKLFVLGDSRTGPATAVA 497

Query: 453 AIDEGRKAAEGI 464
           A+ +GRKAA  I
Sbjct: 498 AVADGRKAANAI 509



 Score = 26.9 bits (58), Expect = 0.005
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 17  AKKP---LHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHNYIPQW 68
           AK P   ++ R   F EI   F  ++A  +A RCL+CG      +C + +Y  ++
Sbjct: 550 AKMPELAINKRLDNFDEIELGFNDEEAMLEAARCLECG-CQANTECALRDYATEY 603