Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 777 a.a., FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 89.4 bits (220), Expect = 4e-22
 Identities = 112/414 (27%), Positives = 173/414 (41%), Gaps = 61/414 (14%)

Query: 55  CEWKCPVHNYIPQWLKLANEGRILEAADLAHQTNSLPE-VCGRVCPQDRLCEGSCTLNAD 113
           C+  CP    + +  +L  EG I EA D+A      P  VCG +CP   LC   C+ +  
Sbjct: 316 CQSSCPTGMPVQERWRLVREGLIDEAVDVALAYTPFPATVCGYLCPN--LCMQGCSRSLQ 373

Query: 114 -FGAVTIGNIEKYITDTAFEMGWKPDMSNVVWTDKKVAIIGAGPAGLAAADILVRNGVRP 172
               V I  I K     A      P +  +  T  +VA+IG G AG++ A  L   GV  
Sbjct: 374 RMKPVDITRIGK-----AGAASRAPKLPPLTGT--RVAVIGGGAAGISVAWQLRMRGVAA 426

Query: 173 VVFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEY 232
            V+D   E+GG ++  IP  ++ + V++       E+     L   +G+D    QL  + 
Sbjct: 427 TVYDMEKELGGKISSAIPGSRIPQDVLDAELARAREVLPHVHLQQRLGKD-EFAQLRSDN 485

Query: 233 DAVFLGVGTYQYMRAGLANEDAPGVYDALPFLISNTYKVMELNNEAPFIDMAGKNVVVLG 292
           D V L  G            +AP +       ++ T  +  L +        GK VV++G
Sbjct: 486 DFVVLATGA-----------NAPRMLPVPGKELART-ALEFLKSAKSGSGSVGKRVVIVG 533

Query: 293 GGDTAMDCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVN 352
            G+   D    + R GA  +      D +      +E + A+  G  F +       E+ 
Sbjct: 534 AGNVGCDVATEAARLGAESITLI---DIQTPAAFGKEREEAEHVGATFRWPC--FTKEIT 588

Query: 353 AQGQVTGVKVVKTALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGFQPHKMAWLEPFDV 412
            +G V          GE                 +LPA+ VI + G  P  + +L P D+
Sbjct: 589 PEGLV-------LTTGE-----------------LLPAETVIFSIGDAP-GLDYL-PDDI 622

Query: 413 ELDQWGRIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILD 466
            +++ G +     Q    QTT+ ++FA GDAVR   L+  AI  GRKAAE I++
Sbjct: 623 AVER-GHVVVNDIQ----QTTDARVFAIGDAVR-PGLLTQAIGMGRKAAEAIVE 670