Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1428 a.a., formate dehydrogenase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  196 bits (499), Expect = 3e-54
 Identities = 143/443 (32%), Positives = 207/443 (46%), Gaps = 32/443 (7%)

Query: 36  TKQQATAQ----ADRCLDCGNPYCEWKCPVHNYIPQWLKLANEGRILEAADLAHQTNSLP 91
           TKQ+  A     +D   DC  P C+  CP    + ++L    +G   +A  +  +T  LP
Sbjct: 92  TKQRQAALNAILSDHFADCEAP-CQQACPAGVDVQRYLYHIAQGDHTQAVKVIKETLPLP 150

Query: 92  EVCGRVCPQDRLCEGSCTLNADFGAVTIGNIEKYITDTAF---EMGWKPDMSNVVWTDKK 148
              GRVCP    CE  C        + I  ++++  D      E G       +  T KK
Sbjct: 151 LSIGRVCPA--FCETECRRGLIDDPIAIRQLKRHAADLDLADDEHGNSYQPPRLADTGKK 208

Query: 149 VAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFSE 208
           +AIIG+GPAGL+A   L   G    +F+  P+ GG L +GIP ++L K +++    +   
Sbjct: 209 IAIIGSGPAGLSAGYYLSNQGHNIEIFEAMPKAGGWLRYGIPEYRLPKAILDKEIELLCR 268

Query: 209 MGIEFRLNVEVGQDITLQQLLDEYDAVFLGVGTYQYMRAGLANEDAPGVYDALPFLISNT 268
            G+     + +G +I L QL+ ++DAV L +G  + +       +  G Y  + FL  + 
Sbjct: 269 NGLTIHTQMRLGHEIHLNQLITDFDAVCLAIGAQKAVPMHYKGSELAGCYLGVDFLKDHC 328

Query: 269 Y-KVMELNNEAPFIDMAGKNVVVLGGGDTAMDCVRTSIRQGASRVICAYRRDEENMPGSR 327
             K ++L          GK V V+GGG+TA+DC RT++R+G   V   YRR    MP   
Sbjct: 329 LDKQLKL----------GKKVAVIGGGNTAIDCARTAVREGCD-VTLIYRRTRAEMPAEA 377

Query: 328 REVKNAKEEGVEFMFNLQPLGIEVNAQGQVTGVKVVKTALGEPDAAGRRKPEPVAGSEHV 387
            EV  A+ EGV+F F   PL    +A G+V  V   K  LGE DA+GRR P    G    
Sbjct: 378 YEVHEAEVEGVKFHFLTNPLENHSDADGRVQSVTFSKMTLGEADASGRRAPVD-TGETFT 436

Query: 388 LPADAVIMA------FGFQPHKMAWLEPFDVELDQWGRIKAPAKQTYQYQTTNPKIFAGG 441
              D VI A        F       L   ++ L +W  +    +QT    +   K+F  G
Sbjct: 437 EAFDTVIAAVSQAPDLSFMQDPKGQLSHGELALSRWNTLMG-CEQT--MSSGVEKLFVMG 493

Query: 442 DAVRGSDLVVTAIDEGRKAAEGI 464
           DA RG    V AI +GRKAA+ I
Sbjct: 494 DARRGPATAVAAIGDGRKAAKAI 516