Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., glutamate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  272 bits (695), Expect = 2e-77
 Identities = 167/464 (35%), Positives = 242/464 (52%), Gaps = 20/464 (4%)

Query: 13  RVDPAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHNYIPQWLKLA 72
           RV    +P H R   F E+   ++++ A  +A RCL C  P C   CPV   IPQ++   
Sbjct: 13  RVPMPCQPAHERVGNFHEVALGYSREDAMREASRCLQCKKPKCVKGCPVEVQIPQFIAAL 72

Query: 73  NEGRILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLNADFGAVTIGNIEKYITDTAFE 132
            +G +  A     +TNSLP VCGRVCPQ+  CEG+C L A    V IG +E+Y  DT   
Sbjct: 73  AKGDVESAYRTLRETNSLPAVCGRVCPQENQCEGACILGAKGQPVAIGRLERYAADTYMA 132

Query: 133 MGWKPDMSN-----VVWTDKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGGLLTF 187
           +     ++      ++  D KVA IG+GPA L  A  L   G +  V++   E+GG+L +
Sbjct: 133 LDACDQLTGRPECPLIDPDLKVACIGSGPASLTVAGYLSSRGFKVTVYEALHELGGVLVY 192

Query: 188 GIPSFKLEKG-VMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDE-YDAVFLGVGTYQYM 245
           GIP F+L K  ++E       +  +EF  N   G+  ++  L  E Y AVF+GVG     
Sbjct: 193 GIPEFRLPKSDIVEKEIAALRQQEVEFVTNWVGGRTFSIDDLFAEGYKAVFIGVGAGLPR 252

Query: 246 RAGLANEDAPGVYDALPFLISNTYKVMELNNEAPFIDM-----AGKNVVVLGGGDTAMDC 300
              +  E+  GV+ A  +L       + L     F D       G+ V V GGG+ AMD 
Sbjct: 253 FLDIPGENLVGVFSANEYLTR-----VNLGRAYGFPDYDTPVYRGREVTVFGGGNVAMDA 307

Query: 301 VRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVTGV 360
            RT++R GA  V   YRR  + MP    E+++A+EEGV       PLG + +A G++T V
Sbjct: 308 ARTALRLGAESVRIVYRRTRDEMPARLEELEHAEEEGVRLELLAAPLGFKGDADGRLTAV 367

Query: 361 KVVKTALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGFQPHKMAWLEPFDVELDQWGRI 420
            + +  LGEPDA+GRR P PV G+ + LP D  ++A G +P+ +       + LD+ G I
Sbjct: 368 TLQRMELGEPDASGRRSPRPVEGAVYDLPTDLAVIAVGTRPNPILLEATPGLTLDRRGYI 427

Query: 421 KAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGI 464
              A       T+ P ++AGGD V G+  V+ A+  GR+AA+ I
Sbjct: 428 ---AVDEATGMTSIPGVYAGGDIVTGAATVILAMGAGRRAAKDI 468