Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 763 a.a., NADPH-dependent glutamate synthase small chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  274 bits (701), Expect = 7e-78
 Identities = 180/471 (38%), Positives = 263/471 (55%), Gaps = 29/471 (6%)

Query: 9   IDVNRVDPAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHNYIPQW 68
           +++N +D A+   H RK    E+ +  T +QA  +A RCLDC NP C   CPV   IP++
Sbjct: 308 VEMNELD-AEYRSHSRK---EEVNQGLTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRF 363

Query: 69  LKLANEGRILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCT-LNADFGAVTIGNIEKYIT 127
           +K    G  LEAA    +T++LP VCGRVCPQ++ CE  C  L  +   V IG +E++  
Sbjct: 364 IKNIERGEFLEAAKTLKETSALPAVCGRVCPQEKQCESKCIHLKMNEKPVAIGYLERFAA 423

Query: 128 DTAFEMGWKPDMSNVVWTDK---KVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGGL 184
           D   E G    +S  V  +K   KVA+IG+GPAGL+ A  + + G    VF+   EIGG+
Sbjct: 424 DFERESG---QISVPVIAEKNGIKVAVIGSGPAGLSFAGDMAKYGYDVTVFEALHEIGGV 480

Query: 185 LTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDE-YDAVFLGVGTYQ 243
           L +GIP F+L   +++       +MG+ F  +  VG+ I+++ L +E +  +F+  G   
Sbjct: 481 LKYGIPEFRLPNKIVDVEIDNLVKMGVTFIKDCIVGKTISVEDLKEEGFKGIFVASG--- 537

Query: 244 YMRAGLAN-EDAPGVYDALPFLISNTY----KVMELNNEAPFIDMA-GKNVVVLGGGDTA 297
              AGL N  + PG  +++  + SN Y     +M+  +E     +A GKNV V+GGG+TA
Sbjct: 538 ---AGLPNFMNIPGE-NSINIMSSNEYLTRVNLMDAASEDSDTPVAFGKNVAVIGGGNTA 593

Query: 298 MDCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQV 357
           MD VRT+ R GA R +  YRR EE MP    EVK+AKEEGVEF+    P+    + QG V
Sbjct: 594 MDSVRTAKRLGAERAMIIYRRSEEEMPARIEEVKHAKEEGVEFLTLHNPIEYIADEQGCV 653

Query: 358 TGVKVVKTALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGFQPHKMAWLEPFDVELDQW 417
             V + K  LGEPDA+GRR P  + G+   +  D  I++ G  P+ +       +EL + 
Sbjct: 654 KQVILQKMELGEPDASGRRSPVAIPGATETIDIDLAIVSVGVSPNPIVPSSIKGLELGRK 713

Query: 418 GRIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILDYL 468
           G I          +++ P I+AGGD VRG   V+ A+ +GRKAA  + + L
Sbjct: 714 GTIAVDDNM----ESSIPMIYAGGDIVRGGATVILAMGDGRKAAAAMNEQL 760