Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., glutamate synthase, small subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  209 bits (533), Expect = 1e-58
 Identities = 151/480 (31%), Positives = 227/480 (47%), Gaps = 61/480 (12%)

Query: 8   FIDVNRVDPAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHNYIPQ 67
           F+++ R +   +P+  R  ++ ++ +         QA RC+DCG P+C W CP+ N  P+
Sbjct: 7   FLNIPRQEAGYRPVSERITDYSQVEQTLNTNSRKLQASRCMDCGVPFCHWACPIGNKQPE 66

Query: 68  WLKLANEGRILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLNADFGA-VTIGNIEKYI 126
           W     +G+  EA ++   T   PE  GR+CP   LCE SC L       VTI   E  I
Sbjct: 67  WQDALFKGKWKEAYEVLSSTCDFPEFTGRICPA--LCEKSCVLKLSCDQPVTIRENEAAI 124

Query: 127 TDTAFEMGWKPDMSNVVWTDKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGGLLT 186
            + AF  G+   + +     KKVA++GAGPAGL  A+ L   G    +FD+    GGLL 
Sbjct: 125 VEAAFREGYI-QVQHPQRNGKKVAVVGAGPAGLVVANQLNLKGYTVTLFDKDEAAGGLLR 183

Query: 187 FGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEYDAVFLGVGTYQYMR 246
           FGIP+FKL+K V++ R +I +  GI+F    E+G +I +  L + +DA  +  GT     
Sbjct: 184 FGIPNFKLDKNVIDRRMKILAAEGIQF----EMGVEIDVNHLPEGFDAYCICTGTPTARD 239

Query: 247 AGLANEDAPGVYDALPFLISNTYKVMELNN--EAPFIDMAGKNVVVLGGGDTAMDCVRTS 304
             +   +  G++ AL  L     +++E     +   ++  GK V+V+GGGDT  DC+ TS
Sbjct: 240 LSIPGRELKGIHFALEMLAQQN-RILEGQTFPKDKLVNAKGKKVLVIGGGDTGSDCIGTS 298

Query: 305 IRQGASRVICAYRRDEENMPGSR---------------REVKNAKEEGVEFMFNLQPLGI 349
           +RQGA+ V        E MP                   +  ++ EEG    + L     
Sbjct: 299 VRQGATSV-----TQIEIMPKPPVGHNPSTPWPQWPVVFKTTSSHEEGCTRRWCLTSNQF 353

Query: 350 EVNAQGQVTGVKVVKTALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGF-QPHKMAWLE 408
            +   G+VTGV+V +     P   G R    + G + V+ AD V++A GF +P +  + E
Sbjct: 354 -LGKNGKVTGVEVEEVE-WTPATDGGRPTMNLTGKKEVIEADMVLLAMGFLKPEQPKFAE 411

Query: 409 PFDVELDQWGRIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILDYL 468
                                       +F  GDA  G+ LVV A+  GRKAA  I  YL
Sbjct: 412 ---------------------------NVFLAGDAATGASLVVRAMAGGRKAAADIDHYL 444