Pairwise Alignments

Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1482 a.a., Glutamate synthase domain 2 from Pseudomonas stutzeri RCH2

 Score = 1843 bits (4773), Expect = 0.0
 Identities = 914/1474 (62%), Positives = 1145/1474 (77%), Gaps = 8/1474 (0%)

Query: 3    LYDPSLEKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLLQK 62
            L+ P   KDNCGFGLIAHM+G+ASH L++TAI +L  MTHRGGI ADGKTGDGCGLL+QK
Sbjct: 5    LFRPEEFKDNCGFGLIAHMQGEASHHLLKTAIQSLTCMTHRGGINADGKTGDGCGLLMQK 64

Query: 63   PDSYLRLIAEEQHW-KLSKQYAIGMLFLSRDPHKAQLAQQIVNQELAKETLSVAGWRKVP 121
            PD++LR  A E    +L  QYA+GM+FL  D  KA  A+  +++E+A + L++ GWR+VP
Sbjct: 65   PDAFLRAKALEHFGTELPAQYAVGMIFLDPDASKADRARARLSEEIAAQGLALVGWREVP 124

Query: 122  TNPKVLGPIALDSLPDIQQVFISAPAGWRERDVERRLYIARRRIEKQITDDRDFYICSLS 181
             +  VLG +AL+ LP I+QVF+S   G  ER+   +L+ ARRR E  + DD  FY+CSLS
Sbjct: 125  VDTSVLGQLALERLPRIEQVFVSGE-GLEEREFGIKLFFARRRAEVALADDSAFYVCSLS 183

Query: 182  TQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLAHNGE 241
             + ++YKGL MPADL +FY DL D R+ +AIC+FHQRFSTNT P+W LAQPFR+LAHNGE
Sbjct: 184  DKDIIYKGLMMPADLAQFYPDLGDERLATAICVFHQRFSTNTMPQWRLAQPFRFLAHNGE 243

Query: 242  INTIEGNRQWARARAYKFASPLLPDLQSAAPFVNETGSDSSSLDNMLDLFLAGGMDIFRA 301
            INTI GNR WA+AR  KFA+ LLPDL+S +P +N TGSDSSS+DNML+L + GGMD+FR 
Sbjct: 244  INTITGNRNWAQARRLKFANELLPDLESLSPLINRTGSDSSSMDNMLELLVTGGMDLFRG 303

Query: 302  MRMLVPPAWQNHPDMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRNGLRPAR 361
            +RM++PPAWQN   MDPDLRAFY+FNS HMEPWDGPAG+VL+DGR+A C LDRNGLRPAR
Sbjct: 304  LRMIIPPAWQNVETMDPDLRAFYEFNSMHMEPWDGPAGVVLTDGRHAVCLLDRNGLRPAR 363

Query: 362  YVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEIDNDLKSRH 421
            +V TK+  ITLASEVG+WDY P++V  KGRVGPG++L +DT  GK+  + +IDN LK++ 
Sbjct: 364  WVTTKNGYITLASEVGVWDYKPEDVLAKGRVGPGQILAVDTLTGKVLHTDDIDNHLKAQQ 423

Query: 422  PYREWMENNVHKLTPFSQLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQILRVLGDMAQ 481
            PY++W+  N  ++   S L D+  G   +DAD LK Y K + ++ EE DQ+LR L +  Q
Sbjct: 424  PYKKWLRQNALRIQ--STLDDNDHGSAFYDADQLKQYMKMYQVTFEERDQVLRPLAEQGQ 481

Query: 482  EAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATSIGQEMNVF 541
            EAVGSMGDDTPMAVLS + R   DYFRQ+FAQVTNPPIDPLRE  VMSL T +G E NVF
Sbjct: 482  EAVGSMGDDTPMAVLSRRVRSPYDYFRQQFAQVTNPPIDPLREAIVMSLETCLGAERNVF 541

Query: 542  CETDGHAHRVTFDSPILLYSDMQQLLTLSDQHYRNTILDINFDPQEKNLKQAVLDLCDKA 601
             ET  HA+R    +P++  +  + ++ L    +   ++D+N+D +   L+ A+ ++ D+A
Sbjct: 542  EETAEHANRAILTTPVISPAKWRTIMNLERPGFERLVIDLNYD-ESIGLEAAIRNIADQA 600

Query: 602  EQVVREGTVLVVLSDRALTADRLPIPAAMAVGAVQARLVEANLRCDANIIIETGAARDPH 661
            E+ VR G VL+VLSDR +   +LP+ A++AVGAV  RLV+  LRC  NI++ET  ARDPH
Sbjct: 601  EEAVRGGKVLLVLSDRHIGPGKLPVHASLAVGAVHHRLVDTGLRCSCNILVETATARDPH 660

Query: 662  HFAVLIGFGATAVYPYLAYETLGKMIDDGALQKSYREVMQNYQYGINKGLYKIMSKMGIS 721
            HFAVLIGFGATAVYP+LAYE LG +I  G +     EV ++Y+ GI+KGL KI+SKMGIS
Sbjct: 661  HFAVLIGFGATAVYPFLAYEVLGDLIRTGEVLGDLYEVFKHYRKGISKGLMKIISKMGIS 720

Query: 722  TVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQDLFNLSRKAWAKRKPLEH 781
            T+ASYR +QLFEAVGL  ++V+L F+GV +RI+GA F+D E +   L+ +AW+ RKP++ 
Sbjct: 721  TIASYRGAQLFEAVGLSDEIVELSFRGVASRIKGARFEDLEAEQKALAAEAWSSRKPIQQ 780

Query: 782  GGLLKYVHGGEYHAYNPDVVGTLQKAVKSGEIMDYREFAQQVNQRPVAMLRDLLRLKTSD 841
            GGLLK+V+GGEYHAYNPDVV  LQ AV+SG+   ++E+   V+QRPVAMLRDLL++K +D
Sbjct: 781  GGLLKFVYGGEYHAYNPDVVSALQMAVQSGDYSRFKEYTALVDQRPVAMLRDLLKVKLAD 840

Query: 842  KPLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEALATAMNRLGGYSNSGEGGEDPRRFG 901
            +PL LE +EP   + KRFDSA +S+GALSPEAHEA+A AMNR+G  SNSGEGGEDP R+G
Sbjct: 841  QPLALEEVEPLDAILKRFDSAGISLGALSPEAHEAIAAAMNRIGARSNSGEGGEDPARYG 900

Query: 902  TERNSRIKQVASGRFGVTPHYLTNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYSV 961
            TER+S+IKQVA+GRFGVTP YL NA+VLQIKVAQGAKPGEGGQLPG KV   IA+LRY+V
Sbjct: 901  TERSSKIKQVATGRFGVTPEYLVNAEVLQIKVAQGAKPGEGGQLPGGKVNGLIARLRYAV 960

Query: 962  PGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALVSVKLVSEPGVGTIATGVAKAYADL 1021
            PGVTLISPPPHHDIYSIEDLAQLIFDLKQ+NP+ALVSVKLV+EPGVGTIA GVAKAYADL
Sbjct: 961  PGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPQALVSVKLVAEPGVGTIAAGVAKAYADL 1020

Query: 1022 ITISGYDGGTAASPLTSVKYAGSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDVI 1081
            ITISGYDGGT ASPLTS++YAGSPWELGLAET Q L  N LR K+R+Q DGGLKTGLDVI
Sbjct: 1021 ITISGYDGGTGASPLTSIRYAGSPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGLDVI 1080

Query: 1082 KGAILGAESFGFGTAPMVAMGCKFLRICHLNNCATGVATQDETLRKDYFKGLPEMVMNYF 1141
            K AILGAESFGFGTAPM+A+GCK+LRICHLNNCATGVATQ+E LRKD+F G  +MV+N+F
Sbjct: 1081 KAAILGAESFGFGTAPMIALGCKYLRICHLNNCATGVATQNEQLRKDHFIGTVDMVVNFF 1140

Query: 1142 KGLAEEVRGYLAELGVEKLTDLIGRTDLLEVVEGMTAKQSKLDLSDLLEAPVSPQNLPLY 1201
            + +AEE R +LA+LGV  L +LIGRTDLLE++ G TAKQ+ LDLS LL     P + P +
Sbjct: 1141 QFVAEETREWLAKLGVRSLGELIGRTDLLELLPGETAKQNSLDLSPLLGGSNIPADKPQF 1200

Query: 1202 C-TEPNTPFDKGALNQKIVEDALAAVENQQSLELYYNVINTDRSIGARLSGEIAKRYGNL 1260
            C  E N PFD+G L +++V+ A AA++ +   E    + N DRSIGAR+SGEIA+++GN 
Sbjct: 1201 CQVEKNPPFDQGLLAEEMVKLAKAAIDTKSGGEFELEICNCDRSIGARVSGEIARQHGNQ 1260

Query: 1261 GVATSPIKVVLNGTAGQSFGVWNAGGLELYLTGDANDYVGKGMAGGKIVIRPHQGTAFVC 1320
            G+A +PI     GTAGQSFGVWNAGGL LYL GDANDYVGKGM GGK+V+ P QG A+  
Sbjct: 1261 GMAGAPITFRFKGTAGQSFGVWNAGGLNLYLEGDANDYVGKGMTGGKLVVTPPQGAAYRS 1320

Query: 1321 NEATIIGNTCLYGATGGKLFAAGKAGERFAVRNSGTIAVIEGAGDNACEYMTGGIVAILG 1380
             ++ IIGNTCLYGATGGKLFAAG AGERFAVRNSG  AV+EG GD+ CEYMTGG V +LG
Sbjct: 1321 QDSAIIGNTCLYGATGGKLFAAGTAGERFAVRNSGAHAVVEGTGDHCCEYMTGGFVCVLG 1380

Query: 1381 ATGVNFGAGMTGGFAYVLDENGDFQGRVNDESVEAVALTD--LYIHQEHLRGLIAEHLEE 1438
             TG NFG+GMTGGFAYVLD +  F  RVN+E V    +T   +  ++ HL+ ++ E++ E
Sbjct: 1381 KTGHNFGSGMTGGFAYVLDMDNSFVDRVNNELVNLQRITGEAMEAYRSHLQDVLREYVAE 1440

Query: 1439 TGSAHAERILANFDEWIPKFYLIKPQAADLRTLL 1472
            T S     +L N D+++ +F+L+KP+AA+L +LL
Sbjct: 1441 TASEWGAELLDNLDDYLRRFWLVKPKAANLASLL 1474