Pairwise Alignments

Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1536 a.a., glutamate synthase (ferredoxin) from Synechococcus elongatus PCC 7942

 Score = 1233 bits (3189), Expect = 0.0
 Identities = 694/1514 (45%), Positives = 951/1514 (62%), Gaps = 71/1514 (4%)

Query: 9    EKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLLQKPDSYLR 68
            E+D CG G +A  +G+ASH LV  ++ AL  M HRGG +AD  +GDG GL+   P   L+
Sbjct: 23   ERDACGVGFVADQQGRASHDLVEKSLRALGCMEHRGGCSADSDSGDGAGLMTAIPTDLLK 82

Query: 69   LIAEEQHWKLSKQYAIGMLFLSRDPHKAQLAQQIVNQELAKETLSVAGWRKVPTNPKVLG 128
                           +GM+FL +   +A +A+Q++ Q +A+E L   GWR VPT P+VLG
Sbjct: 83   TWLGAAAPADLSSVGLGMVFLPQHGAEATIARQLIEQIVAEENLQFLGWRLVPTRPEVLG 142

Query: 129  PIALDSLPDIQQVFISAPAGWRERDVERRLYIARRRIEKQI-----TDDRDFYICSLSTQ 183
              A  +LP I+Q FI++    R+ + ER+LY+ R+R+E  +     T   DFYICSLS++
Sbjct: 143  QQARANLPRIEQCFIASEQ-LRDDEFERQLYLVRKRVETAVKKALGTASEDFYICSLSSR 201

Query: 184  VLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLAHNGEIN 243
             +VYKG+     L +FY DL +    S   ++H+RFSTNT P+WPLAQP R+L HNGEIN
Sbjct: 202  TVVYKGMVRSEVLGQFYTDLTNPAYTSNFGVYHRRFSTNTMPKWPLAQPMRFLGHNGEIN 261

Query: 244  TIEGNRQWARARAYKFASPLLPD-LQSAAPFVNETGSDSSSLDNMLDLFLAGGMDIFRAM 302
            T+ GN  W  AR      P   D +    P V+   SDS++LDN L+L +  G     A+
Sbjct: 262  TLLGNINWMMARQADLQHPAWGDRIGDLLPVVDLNRSDSANLDNALELLVNSGRTPQEAL 321

Query: 303  RMLVPPAWQNHPDM--DPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRNGLRPA 360
             ++VP A+QN P +   P++  FY+F S   EPWDGPA +V SDG+     LDRNGLRPA
Sbjct: 322  MVMVPEAYQNQPALADHPEIVDFYEFYSGLQEPWDGPALLVFSDGKKVGACLDRNGLRPA 381

Query: 361  RYVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEIDNDLKSR 420
            RY IT D  I  ASE G+ D   + + EKGR+GPG+++ +D    ++ ++ +I   + S+
Sbjct: 382  RYSITADGYIVFASEAGVVDLPVETIIEKGRLGPGQMIEVDLETKEVIKNWDIKKRIASQ 441

Query: 421  HPYREWM-ENNVHKLTPFSQLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQILRVLGDM 479
             PY +W+ E  V +   F    + ++G    D DLL+  Q  F  + E++D ++  +   
Sbjct: 442  QPYGQWLQERQVLENKDFGN--EQQLG----DFDLLRL-QTGFGYTAEDVDMVIEAMASD 494

Query: 480  AQEAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATSIGQEMN 539
             +E    MGDD P+AVLSSK RL+ DYF+Q+FAQVTNP IDPLRE  VMSL+ ++G   N
Sbjct: 495  GKEPTFCMGDDIPLAVLSSKARLLYDYFKQRFAQVTNPAIDPLRESLVMSLSMTLGARDN 554

Query: 540  VFCETDGHAHRVTFDSPILLYSDMQQLL--TLSDQHYRNTILDINFDPQEKNLKQAVLDL 597
            +       A  +  DSP+L  ++++Q+   TL      +T+  I   P    L+ A+  L
Sbjct: 555  LLQVGPESARLLKLDSPVLNEAELEQVKQSTLKAAEL-STLYAIEQGPD--GLQAAIAAL 611

Query: 598  CDKAEQVVREGTVLVVLSDRA---LTADRLPIPAAMAVGAVQARLVEANLRCDANIIIET 654
            C +AEQ V+ G  +++LSDR    L      IP  +AVGAV   L+   LR  A+++++T
Sbjct: 612  CQQAEQAVQAGHQILILSDRTGAGLAPQISYIPPLLAVGAVHHHLIRQGLRMKASLVVDT 671

Query: 655  GAARDPHHFAVLIGFGATAVYPYLAYETLG---------KMIDDGAL-QKSYREVMQNYQ 704
                  HHFA LIG+GA+AV P+LA ET+           +++ G + Q S     QN++
Sbjct: 672  AQCWSTHHFACLIGYGASAVCPWLALETVRHWWHAPKTQSLMERGKIAQVSLAGAQQNFR 731

Query: 705  YGINKGLYKIMSKMGISTVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQD 764
              +  GL KI+SKMGIS + SY  +Q+FEA+GL  +VVDL F+G T+R+ G    D   +
Sbjct: 732  KAVEAGLLKILSKMGISLLPSYHGAQIFEAIGLSMEVVDLAFRGTTSRLGGLTLADIAHE 791

Query: 765  LFNLSRKAWAK--RKPLEHGGLLKYVHGGEYHAYNPDVVGTLQKAVKSGEIMDYRE-FAQ 821
            + +   +A+ +  +K LE+ G ++Y  GGEYH  +P++   L KAV +G+  D+ E + +
Sbjct: 792  VMSFHTRAFPELNQKKLENFGFVQYRPGGEYHMNSPEMSKALHKAVAAGKNYDHFEVYRK 851

Query: 822  QVNQRPVAMLRDLLRLKTSDKPLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEALATAM 881
             + +RPV  LRDLL+  +    + L+ +E    + +RF +  MS+GALS EAHE LA AM
Sbjct: 852  YLEERPVTALRDLLQFVSDRPAISLDEVESVEAIVQRFCTGGMSLGALSREAHETLAIAM 911

Query: 882  NRLGGYSNSGEGGEDPRRF-----------------------GTERNSRIKQVASGRFGV 918
            NRLGG SNSGEGGEDP R+                       G   +S IKQ+ASGRFGV
Sbjct: 912  NRLGGKSNSGEGGEDPVRYKVLGDVDAEGNSPTLPHLHGLRNGDTASSAIKQIASGRFGV 971

Query: 919  TPHYLTNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYSVPGVTLISPPPHHDIYSI 978
            TP YL +AD L+IKV+QGAKPGEGGQLPG KV+  IA LR S  GV+LISPPPHHDIYSI
Sbjct: 972  TPEYLMSADQLEIKVSQGAKPGEGGQLPGKKVSPYIAFLRNSKAGVSLISPPPHHDIYSI 1031

Query: 979  EDLAQLIFDLKQINPKALVSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTS 1038
            EDLAQLIFDL QINPKA VSVKLV+E G+GT+A GVAKA AD+I +SG+DGGT ASPL+S
Sbjct: 1032 EDLAQLIFDLHQINPKAQVSVKLVAEIGIGTVAAGVAKANADIIQVSGHDGGTGASPLSS 1091

Query: 1039 VKYAGSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDVIKGAILGAESFGFGTAPM 1098
            +K+AG PWELGL E  + L+ N LR ++ L+VDGGLKTG DV+  A++GAE FGFG+  M
Sbjct: 1092 IKHAGGPWELGLTEVHRVLMENQLRQRVLLRVDGGLKTGWDVVMAALMGAEEFGFGSIAM 1151

Query: 1099 VAMGCKFLRICHLNNCATGVATQDETLRKDYFKGLPEMVMNYFKGLAEEVRGYLAELGVE 1158
            +A GC   R+CH NNC  GVATQ E LRK  F G+PE V+N+F  +AEEVR  LA+LG  
Sbjct: 1152 IAEGCIMARVCHTNNCPVGVATQQEQLRK-RFTGIPEHVVNFFILIAEEVRSILAKLGYR 1210

Query: 1159 KLTDLIGRTDLLEVVEGM-TAKQSKLDLSDLLEAPVSPQNLPLYCTEPNTPFDKGAL--N 1215
             LT+L GRTDLL     +   K + L+L  L++ P +  +      +     D G +  +
Sbjct: 1211 SLTELTGRTDLLAPRPDLKLTKTAALNLDCLIKLPDTRSDRSWLVHD--EVHDNGPVLDD 1268

Query: 1216 QKIVEDAL-AAVENQQSLELYYNVINTDRSIGARLSGEIAKRYGNLGVATSPIKVVLNGT 1274
            Q +   AL AA+ NQ S+ +   ++NTDRS+GARL+G IA+RYGN G     I +  NG+
Sbjct: 1269 QLLANPALTAAIANQDSVAIEQAIVNTDRSVGARLAGAIAQRYGNYGF-EGQISLNFNGS 1327

Query: 1275 AGQSFGVWNAGGLELYLTGDANDYVGKGMAGGKIVIRPHQGTAFVCNEATIIGNTCLYGA 1334
            AGQSFG +N  G+ L L G+ANDYVGKGM GG+I++RP  G  F  ++++I+GNTCLYGA
Sbjct: 1328 AGQSFGAFNISGVSLNLVGEANDYVGKGMNGGEIIVRPEAGVRFDPSQSSIVGNTCLYGA 1387

Query: 1335 TGGKLFAAGKAGERFAVRNSGTIAVIEGAGDNACEYMTGGIVAILGATGVNFGAGMTGGF 1394
            TGG LFA G+AGERF VRNS   AV+EG GD+ CEYMTGG + +LG  G N GAGMTGG 
Sbjct: 1388 TGGSLFANGRAGERFGVRNSKAQAVVEGTGDHCCEYMTGGTIVVLGPCGRNVGAGMTGGL 1447

Query: 1395 AYVLDENGDFQGRVNDESVEAVALTDLYIHQEHLRGLIAEHLEETGSAHAERILANFDEW 1454
            AY LDE+G F  +VN E V+ +        ++ L+ LI  H E+TGS  A  IL  ++++
Sbjct: 1448 AYFLDEDGQFPAKVNPEIVK-LQRVSTSAGEQQLKQLITAHAEKTGSPKACHILEQWEQY 1506

Query: 1455 IPKFY-LIKPQAAD 1467
            +P+F+ ++ P  AD
Sbjct: 1507 LPQFWQVVPPSEAD 1520